Smp_173650 (Schistosoma mansoni)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Smp_173650 T332662_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN

NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.424 0.338
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Smp_173650.1:pep Sox 11 78

Links

Other Sox family TFs
Other Schistosoma mansoni TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NCU02819 Neurospora crassa NCU02819 D 0.424
SROB_0001231001 Schistosoma rodhaini SROB_0001231001 I 0.741
SMTD_0001766201 Schistosoma mattheei SMTD_0001766201 I 0.741
SMRZ_0000758001 Schistosoma margrebowiei SMRZ_0000758001 I 0.741
SCUD_0001691501 Schistosoma curassoni SCUD_0001691501 I 0.714
A_02303 Schistosoma haematobium A_02303 I 0.741
Sjc_0021990 Schistosoma japonicum Sjc_0021990 I 0.735
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.443
gw1.199.74.1 Physcomitrella patens gw1.199.74.1 I 0.419
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.424
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.437
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.431
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.424
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.437
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.424
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.437
ECPE_0001729301 Echinostoma caproni ECPE_0001729301 N 0.437
DILT_0001682001 Diphyllobothrium latum DILT_0001682001 N 0.446
TRE_0001526701 Trichobilharzia regenti TRE_0001526701 N 0.573