CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SOCG_00309
(
Schizosaccharomyces octosporus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SOCG_00309
T332674_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPX72546
Sox
310
355
VARILNPFQLYMKENMARIKRHYPMLSHKELMNKVASEYRQTVSTQ
Links
Other
Sox
family TFs
Other
Schizosaccharomyces octosporus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPOG_02196
Schizosaccharomyces cryophilus
SPOG_02196
N
0.615
PTSG_02585
Salpingoeca rosetta
PTSG_02585
N
0.572
SJAG_02223
Schizosaccharomyces japonicus
SJAG_02223
N
0.531
CGI_10027770
Crassostrea gigas
CGI_10027770
N
0.520
AMSG_09450
Thecamonas trahens
AMSG_09450
N
0.519
LotgiG105193
Lottia gigantea
LotgiG105193
N
0.514
TriadG56122
Trichoplax adhaerens
TriadG56122
N
0.503
OIDMADRAFT_54116
Oidiodendron maius
OIDMADRAFT_54116
N
0.498
DAPPUDRAFT_306626
Daphnia pulex
DAPPUDRAFT_306626
N
0.492
EMIHUDRAFT_117867
Emiliania huxleyi
EMIHUDRAFT_117867
I
0.487
CNG00580
Cryptococcus neoformans
CNG00580
N
0.482
fgenesh1_pm.9__12
Bigelowiella natans
fgenesh1_pm.9__12
N
0.472
CAOG_02676
Capsaspora owczarzaki
CAOG_02676
N
0.470
fgenesh2_pg.scaffold_5000103
Monosiga brevicollis
fgenesh2_pg.scaffold_5000103
N
0.470
CapteG178344
Capitella teleta
CapteG178344
N
0.467
V565_033960
Rhizoctonia solani
V565_033960
N
0.454
ENSPMAG00000002918
Petromyzon marinus
ENSPMAG00000002918
N
0.449
Moror_16065
Moniliophthora roreri
Moror_16065
I
0.441
Cflo_06149--XP_001122099.1_APIME
Camponotus floridanus
Cflo_06149--XP_001122099.1_APIME
N
0.437
ACEP23223
Atta cephalotes
ACEP23223
N
0.437
XP_002163918.1
Hydra magnipapillata
XP_002163918.1
I
0.432
fgenesh1_pg.C_scaffold_6000207
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_6000207
N
0.428
MYCFIDRAFT_216928
Pseudocercospora fijiensis
MYCFIDRAFT_216928
N
0.428
TMUE_s0148001000
Trichuris muris
TMUE_s0148001000
N
0.426
fgenesh2_pg.C_Chr_03000283
Micromonas sp RCC299
fgenesh2_pg.C_Chr_03000283
N
0.418
L804_03818
Cryptococcus gattii
L804_03818
N
0.418
SPBC19G7.04
Schizosaccharomyces pombe
SPBC19G7.04
N
0.418