Solyc03g032130.2 (Solanum lycopersicum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Solyc03g032130.2 T332687_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g032130.2.1 Sox 18 79

Links

Other Sox family TFs
Other Solanum lycopersicum TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMGB3 Arabidopsis thaliana AT1G20696 I 0.585
MDP0000242568 Malus domestica MDP0000242568 I 0.581
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.563
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.563
Traes_7DL_0CEFCB39D Triticum aestivum Traes_7DL_0CEFCB39D N 0.508
Traes_7AL_364A6E96F Triticum aestivum Traes_7AL_364A6E96F N 0.508
Traes_7BL_F45C15FA2 Triticum aestivum Traes_7BL_F45C15FA2 N 0.508
Traes_5AL_D1358AF6E Triticum aestivum Traes_5AL_D1358AF6E I 0.500
PDK_20s1781681g001 Phoenix dactylifera PDK_20s1781681g001 N 0.491
PGSC0003DMG400018685 Solanum tuberosum PGSC0003DMG400018685 I 0.478
PDK_20s1434871g001 Phoenix dactylifera PDK_20s1434871g001 I 0.462
MLOC_68913 Hordeum vulgare MLOC_68913 N 0.458
Bo5g030580 Brassica oleracea Bo5g030580 I 0.452
29669.m000844 Ricinus communis 29669.m000844 I 0.450
Thhalv10009970m.g Eutrema salsugineum Thhalv10009970m.g I 0.448
PGSC0003DMG400001567 Solanum tuberosum PGSC0003DMG400001567 I 0.441
Solyc02g082700.2 Solanum lycopersicum Solyc02g082700.2 I 0.441
mgf009330m Mimulus guttatus mgf009330m I 0.439
POPTR_0005s10440 Populus trichocarpa POPTR_0005s10440 I 0.437
SapurV1A.0085s0030 Salix purpurea SapurV1A.0085s0030 I 0.437
Eucgr.J02535 Eucalyptus grandis Eucgr.J02535 I 0.436
PRUPE_ppa012972mg Prunus persica PRUPE_ppa012972mg I 0.431
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.431
gene13043-v1.0-hybrid Fragaria vesca gene13043-v1.0-hybrid I 0.430
Ciclev10032930m.g Citrus clementina Ciclev10032930m.g I 0.428
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.428
Lus10012252.g Linum usitatissimum Lus10012252.g I 0.427
Lus10016025.g Linum usitatissimum Lus10016025.g I 0.427
mgf014518m Mimulus guttatus mgf014518m I 0.427
Ciclev10026715m.g Citrus clementina Ciclev10026715m.g I 0.425
Bra025838 Brassica rapa Bra025838 I 0.424
Bo8g070350 Brassica oleracea Bo8g070350 I 0.424
SapurV1A.0016s0600 Salix purpurea SapurV1A.0016s0600 I 0.424
Bostr.7128s0662 Boechera stricta Bostr.7128s0662 I 0.424
Bo7g061420 Brassica oleracea Bo7g061420 I 0.424
HMGB3 Arabidopsis lyrata fgenesh2_kg.1__2258__AT1G20696.3 I 0.424
Cagra.6160s0027 Capsella grandiflora Cagra.6160s0027 I 0.424
Carubv10012681m.g Capsella rubella Carubv10012681m.g I 0.424
Pm026798 Prunus mume Pm026798 I 0.422
evm.TU.supercontig_26.174 Carica papaya evm.TU.supercontig_26.174 I 0.422
Aquca_015_00344 Aquilegia coerulea Aquca_015_00344 I 0.422
POPTR_0010s19720 Populus trichocarpa POPTR_0010s19720 I 0.421
MTR_5g024180 Medicago truncatula MTR_5g024180 I 0.421
Traes_5DL_DD9491112 Triticum aestivum Traes_5DL_DD9491112 I 0.421
MDP0000607529 Malus domestica MDP0000607529 I 0.421
VIT_13s0067g00640 Vitis vinifera VIT_13s0067g00640 I 0.421
AMTR_s00029p00240750 Amborella trichopoda AMTR_s00029p00240750 I 0.421
SapurV1A.0825s0160 Salix purpurea SapurV1A.0825s0160 I 0.415
mgf006113m Mimulus guttatus mgf006113m I 0.415
F775_32121 Aegilops tauschii F775_32121 N 0.415
mgf008076m Mimulus guttatus mgf008076m I 0.415
mgf016608m Mimulus guttatus mgf016608m I 0.415