TCM_045462 (Theobroma cacao)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 TCM_045462 T332839_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY20062 Sox 51 119

Links

Other Sox family TFs
Other Theobroma cacao TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK10571.1 Cannabis sativa PK10571.1 N 0.711
Gorai.010G218300 Gossypium raimondii Gorai.010G218300 N 0.704
Pm014490 Prunus mume Pm014490 N 0.685
PRUPE_ppa003531mg Prunus persica PRUPE_ppa003531mg N 0.685
SapurV1A.0728s0020 Salix purpurea SapurV1A.0728s0020 N 0.678
SapurV1A.0230s0030 Salix purpurea SapurV1A.0230s0030 N 0.678
orange1.1g043878m.g Citrus sinensis orange1.1g043878m.g N 0.668
Ciclev10011294m.g Citrus clementina Ciclev10011294m.g N 0.668
VIT_14s0006g01840 Vitis vinifera VIT_14s0006g01840 N 0.666
POPTR_0004s09080 Populus trichocarpa POPTR_0004s09080 N 0.658
MDP0000237182 Malus domestica MDP0000237182 N 0.652
28748.m000216 Ricinus communis 28748.m000216 N 0.651
evm.TU.supercontig_116.14 Carica papaya evm.TU.supercontig_116.14 N 0.651
Solyc03g043600.1 Solanum lycopersicum Solyc03g043600.1 N 0.608
PGSC0003DMG400016690 Solanum tuberosum PGSC0003DMG400016690 N 0.608
GLYMA10G34561 Glycine max GLYMA10G34561 N 0.571