tetur23g01950 (Tetranychus urticae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 tetur23g01950 T332884_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bbx
M03975_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN

NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
bbx_1
0.709 0.652
BBX
M05763_2.00
Homo sapiens
TGAWCDNYGWTCA

TGAWCRNHGWTCA
SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX
0.539 0.638
BBX
M05764_2.00
Homo sapiens
TGAACDNYGTTCA

TGAACRNHGTTCA
SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX
0.539 0.638
Bbx
M00196_2.00
Mus musculus
TTCATTGA

TCAATGAA
PBM
Badis et al.(2009)
Bbx_3753
0.506 0.623
gei-3
M00711_2.00
Caenorhabditis elegans
NWNWMWDN

NHWKWNWN
PBM
Narasimhan et al.(2015)
pTH10038
0.476 0.536
Cic
M00195_2.00
Mus musculus
NNTGCTGABN

NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.450 0.551
cic
M06452_2.00
Drosophila melanogaster
YYCATTSA

TSAATGRR
B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386
0.417 0.536
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
tetur23g01950.1 Sox 100 168

Links

Other Sox family TFs
Other Tetranychus urticae TFs

281 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL004381 Aedes aegypti AAEL004381 I 0.446
AAEL011161 Aedes aegypti AAEL011161 I 0.642
AALB003439 Anopheles albimanus AALB003439 I 0.455
Aan_R014485 Calypte anna Aan_R014485 I 0.539
AARA001217 Anopheles arabiensis AARA001217 I 0.455
AARA009897 Anopheles arabiensis AARA009897 I 0.481
ACEP13490 Atta cephalotes ACEP13490 I 0.557
ACEP18843 Atta cephalotes ACEP18843 I 0.450
ACHR004909 Anopheles christyi ACHR004909 I 0.481
ACHR006446 Anopheles christyi ACHR006446 I 0.455
ACOM034716 Anopheles coluzzii ACOM034716 I 0.481
ACUA015009 Anopheles culicifacies ACUA015009 I 0.455
ACYPI004663 Acyrthosiphon pisum ACYPI004663 I 0.457
ADAC008993 Anopheles darlingi ADAC008993 I 0.455
ADAC009062 Anopheles darlingi ADAC009062 I 0.436
ADIR003322 Anopheles dirus ADIR003322 I 0.455
ADIR003385 Anopheles dirus ADIR003385 I 0.487
AEPI004245 Anopheles epiroticus AEPI004245 I 0.481
AEPI005675 Anopheles epiroticus AEPI005675 I 0.455
AFAF009600 Anopheles farauti AFAF009600 I 0.455
AFAF016820 Anopheles farauti AFAF016820 I 0.462
Afo_R006638 Aptenodytes forsteri Afo_R006638 I 0.539
AFUN003674 Anopheles funestus AFUN003674 I 0.506
AFUN006011 Anopheles funestus AFUN006011 I 0.455
AGAP003896 Anopheles gambiae AGAP003896 I 0.481
AGAP003897 Anopheles gambiae AGAP003897 I 0.481
AGAP013411 Anopheles gambiae AGAP013411 I 0.455
Alligator_sinensis_CCG005631.1 Alligator sinensis Alligator_sinensis_CCG005631.1 I 0.450
Alligator_sinensis_CCG019960.1 Alligator sinensis Alligator_sinensis_CCG019960.1 I 0.539
AMAM016153 Anopheles maculatus AMAM016153 I 0.527
AMAM017484 Anopheles maculatus AMAM017484 I 0.455
AMEC010127 Anopheles melas AMEC010127 I 0.455
AMEC018835 Anopheles melas AMEC018835 I 0.416
AMEM005678 Anopheles merus AMEM005678 I 0.455
AMIN000258 Anopheles minimus AMIN000258 I 0.526
AMIN003810 Anopheles minimus AMIN003810 I 0.455
ANCCAN_00149 Ancylostoma caninum ANCCAN_00149 I 0.481
ANCCEY_04123 Ancylostoma ceylanicum ANCCEY_04123 I 0.481
ANCDUO_05529 Ancylostoma duodenale ANCDUO_05529 I 0.481
AQUA002577 Anopheles quadriannulatus AQUA002577 I 0.481
AQUA008168 Anopheles quadriannulatus AQUA008168 I 0.455
ASIM_0000334601 Anisakis simplex ASIM_0000334601 I 0.479
ASTEI00261 Anopheles stephensi ASTEI00261 I 0.455
ASTEI00827 Anopheles stephensi ASTEI00827 I 0.603
ASTEI11145 Anopheles stephensi ASTEI11145 I 0.584
ASU_10300 Ascaris suum ASU_10300 I 0.479
BGIBMGA008274 Bombyx mori BGIBMGA008274 I 0.694
BGIBMGA010263 Bombyx mori BGIBMGA010263 I 0.450
BGLB001462 Biomphalaria glabrata BGLB001462 I 0.444
BGLB009093 Biomphalaria glabrata BGLB009093 I 0.598
Bm5934 Brugia malayi Bm5934 I 0.479
Brh_R008020 Buceros rhinoceros Brh_R008020 I 0.536
B_00914 Schistosoma haematobium B_00914 I 0.485
CapteG223458 Capitella teleta CapteG223458 I 0.575
CapteG39110 Capitella teleta CapteG39110 I 0.575
CapteG39126 Capitella teleta CapteG39126 I 0.450
CBN17413 Caenorhabditis brenneri CBN17413 I 0.481
Cflo_01544--XP_624175.2_APIME Camponotus floridanus Cflo_01544--XP_624175.2_APIME I 0.450
Cflo_04908--XP_624175.2_APIME Camponotus floridanus Cflo_04908--XP_624175.2_APIME I 0.626
CGI_10015746 Crassostrea gigas CGI_10015746 I 0.450
CGI_10018417 Crassostrea gigas CGI_10018417 I 0.579
CJA07419 Caenorhabditis japonica CJA07419 I 0.481
CLEC003268 Cimex lectularius CLEC003268 I 0.450
Cmyd_10001800 Chelonia mydas Cmyd_10001800 I 0.450
Cmyd_10015225 Chelonia mydas Cmyd_10015225 I 0.539
CPIJ005582 Culex quinquefasciatus CPIJ005582 I 0.642
CPIJ012202 Culex quinquefasciatus CPIJ012202 I 0.455
CpipJ_CPIJ005582 Culex pipiens CpipJ_CPIJ005582 I 0.642
CpipJ_CPIJ012202 Culex pipiens CpipJ_CPIJ012202 I 0.455
CRE24068 Caenorhabditis remanei CRE24068 I 0.444
csin104163 Clonorchis sinensis csin104163 I 0.436
D917_02434 Trichinella nativa D917_02434 I 0.444
D918_06270 Trichuris suis D918_06270 I 0.444
ECPE_0001539401 Echinostoma caproni ECPE_0001539401 I 0.419
BBX Anolis carolinensis ENSACAG00000006532 I 0.536
ENSAMEG00000002574 Ailuropoda melanoleuca ENSAMEG00000002574 I 0.539
ENSAMXG00000014362 Astyanax mexicanus ENSAMXG00000014362 I 0.442
ENSAMXG00000017656 Astyanax mexicanus ENSAMXG00000017656 I 0.532
ENSAMXG00000018358 Astyanax mexicanus ENSAMXG00000018358 I 0.450
ENSAPLG00000005336 Anas platyrhynchos ENSAPLG00000005336 I 0.539
BBX Bos taurus ENSBTAG00000006893 I 0.539
ENSBTAG00000019785 Bos taurus ENSBTAG00000019785 I 0.450
ENSBTAP00000009058-D1 Bos grunniens ENSBTAP00000009058-D1 I 0.539
CIC Canis familiaris ENSCAFG00000004858 I 0.450
BBX Canis familiaris ENSCAFG00000009867 I 0.539
ENSCING00000007655 Ciona intestinalis ENSCING00000007655 I 0.421
BBX Callithrix jacchus ENSCJAG00000004843 I 0.539
CIC Callithrix jacchus ENSCJAG00000012847 I 0.450
BBX Cavia porcellus ENSCPOG00000003575 I 0.539
ENSCPOG00000004391 Cavia porcellus ENSCPOG00000004391 I 0.450
ENSCSAG00000006313 Chlorocebus sabaeus ENSCSAG00000006313 I 0.539
bbx Danio rerio ENSDARG00000012699 I 0.539
cica Danio rerio ENSDARG00000071150 I 0.442
BBX Dasypus novemcinctus ENSDNOG00000013923 I 0.539
CIC Dasypus novemcinctus ENSDNOG00000047657 I 0.450
Bbx Dipodomys ordii ENSDORG00000008169 I 0.539
Cic Dipodomys ordii ENSDORG00000008822 I 0.450
CIC Equus caballus ENSECAG00000011342 I 0.450
BBX Equus caballus ENSECAG00000023413 I 0.539
BBX Erinaceus europaeus ENSEEUG00000014092 I 0.539
BBX Echinops telfairi ENSETEG00000005122 I 0.539
CIC Echinops telfairi ENSETEG00000017271 I 0.450
ENSFALG00000006478 Ficedula albicollis ENSFALG00000006478 I 0.536
BBX Felis catus ENSFCAG00000007296 I 0.539
ENSFCAG00000012737 Felis catus ENSFCAG00000012737 I 0.450
CIC Homo sapiens ENSG00000079432 I 0.450
BBX Homo sapiens ENSG00000114439 D 0.539
cicb Gasterosteus aculeatus ENSGACG00000009452 I 0.450
bbx Gasterosteus aculeatus ENSGACG00000020111 I 0.532
CIC Gorilla gorilla ENSGGOG00000000192 I 0.450
BBX Gorilla gorilla ENSGGOG00000028441 I 0.539
ENSGMOG00000005167 Gadus morhua ENSGMOG00000005167 I 0.450
ENSGMOG00000015829 Gadus morhua ENSGMOG00000015829 I 0.532
ENSLACG00000001134 Latimeria chalumnae ENSLACG00000001134 I 0.539
ENSLACG00000002764 Latimeria chalumnae ENSLACG00000002764 I 0.450
BBX Loxodonta africana ENSLAFG00000006362 I 0.532
ENSLOCG00000005165 Lepisosteus oculatus ENSLOCG00000005165 I 0.439
ENSMEUG00000016625 Macropus eugenii ENSMEUG00000016625 I 0.450
BBX Meleagris gallopavo ENSMGAG00000014384 I 0.539
ENSMICG00000015176 Microcebus murinus ENSMICG00000015176 I 0.450
BBX Myotis lucifugus ENSMLUG00000007351 I 0.544
ENSMLUG00000016650 Myotis lucifugus ENSMLUG00000016650 I 0.450
BBX Macaca mulatta ENSMMUG00000008787 I 0.539
ENSMMUG00000012174 Macaca mulatta ENSMMUG00000012174 I 0.450
ENSMMUP00000011518 Macaca fascicularis ENSMMUP00000011518 I 0.539
BBX Monodelphis domestica ENSMODG00000001748 I 0.539
ENSMPUG00000007557 Mustela putorius furo ENSMPUG00000007557 I 0.450
ENSMPUG00000009907 Mustela putorius furo ENSMPUG00000009907 I 0.539
Cic Mus musculus ENSMUSG00000005442 D 0.450
Bbx Mus musculus ENSMUSG00000022641 D 0.506
ENSNLEG00000003524 Nomascus leucogenys ENSNLEG00000003524 I 0.539
ENSNLEG00000010614 Nomascus leucogenys ENSNLEG00000010614 I 0.450
BBX Ornithorhynchus anatinus ENSOANG00000007497 I 0.539
ENSOARG00000007985 Ovis aries ENSOARG00000007985 I 0.450
ENSOARG00000018829 Ovis aries ENSOARG00000018829 I 0.539
BBX Oryctolagus cuniculus ENSOCUG00000001686 I 0.539
ENSOCUG00000006458 Oryctolagus cuniculus ENSOCUG00000006458 I 0.450
CIC Otolemur garnettii ENSOGAG00000003964 I 0.450
BBX Otolemur garnettii ENSOGAG00000008056 I 0.539
ENSONIG00000004775 Oreochromis niloticus ENSONIG00000004775 I 0.530
ENSONIG00000004979 Oreochromis niloticus ENSONIG00000004979 I 0.436
ENSONIG00000013108 Oreochromis niloticus ENSONIG00000013108 I 0.450
BBX Ochotona princeps ENSOPRG00000017013 I 0.539
bbx Oryzias latipes ENSORLG00000005486 I 0.532
cica Oryzias latipes ENSORLG00000007091 I 0.444
cicb Oryzias latipes ENSORLG00000013259 I 0.450
ENSP00000160740 Macaca fascicularis ENSP00000160740 I 0.450
ENSP00000160740-D1 Bos grunniens ENSP00000160740-D1 I 0.450
ENSPANG00000009039 Papio anubis ENSPANG00000009039 I 0.450
ENSPANG00000018335 Papio anubis ENSPANG00000018335 I 0.539
BBX Procavia capensis ENSPCAG00000013443 I 0.539
CIC Procavia capensis ENSPCAG00000017001 I 0.444
ENSPFOG00000000116 Poecilia formosa ENSPFOG00000000116 I 0.450
ENSPFOG00000000813 Poecilia formosa ENSPFOG00000000813 I 0.532
ENSPFOG00000016231 Poecilia formosa ENSPFOG00000016231 I 0.450
ENSPPYG00000010041 Pongo abelii ENSPPYG00000010041 I 0.450
ENSPPYG00000013578 Pongo abelii ENSPPYG00000013578 I 0.539
ENSPSIG00000015872 Pelodiscus sinensis ENSPSIG00000015872 I 0.539
CIC Pan troglodytes ENSPTRG00000011051 I 0.450
BBX Pan troglodytes ENSPTRG00000015187 I 0.539
BBX Pteropus vampyrus ENSPVAG00000010534 I 0.539
CIC Pteropus vampyrus ENSPVAG00000016806 I 0.450
Bbx Rattus norvegicus ENSRNOG00000001971 I 0.506
Cic Rattus norvegicus ENSRNOG00000056118 I 0.450
ENSSHAG00000003009 Sarcophilus harrisii ENSSHAG00000003009 I 0.539
CIC Sus scrofa ENSSSCG00000003030 I 0.450
BBX Sus scrofa ENSSSCG00000011943 I 0.539
ENSSTOG00000000852 Ictidomys tridecemlineatus ENSSTOG00000000852 I 0.450
CIC Tupaia belangeri ENSTBEG00000009044 I 0.450
ENSTGUG00000013611 Taeniopygia guttata ENSTGUG00000013611 I 0.536
CIC Tetraodon nigroviridis ENSTNIG00000003521 I 0.450
bbx Tetraodon nigroviridis ENSTNIG00000008596 I 0.539
bbx Takifugu rubripes ENSTRUG00000003077 I 0.499
CIC Takifugu rubripes ENSTRUG00000007193 I 0.450
ENSTSYG00000000857 Tarsius syrichta ENSTSYG00000000857 I 0.539
BBX Tursiops truncatus ENSTTRG00000013182 I 0.539
CIC Tursiops truncatus ENSTTRG00000013873 I 0.450
BBX Vicugna pacos ENSVPAG00000007818 I 0.539
ENSXMAG00000009457 Xiphophorus maculatus ENSXMAG00000009457 I 0.532
EVEC_0000011601 Enterobius vermicularis EVEC_0000011601 I 0.442
bbx Drosophila melanogaster FBgn0024251 D 0.709
GA16961 Drosophila pseudoobscura FBgn0076975 I 0.709
GF17645 Drosophila ananassae FBgn0094663 I 0.417
GF20922 Drosophila ananassae FBgn0097927 I 0.709
GG19727 Drosophila erecta FBgn0111928 I 0.709
GG23823 Drosophila erecta FBgn0115962 I 0.417
GI21541 Drosophila mojavensis FBgn0144271 I 0.709
GL20955 Drosophila persimilis FBgn0158550 I 0.484
GM23082 Drosophila sechellia FBgn0177950 I 0.709
GM23104 Drosophila sechellia FBgn0177972 I 0.417
GD19345 Drosophila simulans FBgn0190847 I 0.417
GJ16014 Drosophila virilis FBgn0203199 I 0.709
GK10919 Drosophila willistoni FBgn0212930 I 0.417
GK25081 Drosophila willistoni FBgn0227040 I 0.709
GE17925 Drosophila yakuba FBgn0235361 I 0.709
GE25659 Drosophila yakuba FBgn0242721 I 0.417
cic Drosophila melanogaster FBgn0262582 D 0.417
GB43462 Apis mellifera GB43462 I 0.450
GB48450 Apis mellifera GB48450 I 0.626
Gfo_R002593 Geospiza fortis Gfo_R002593 I 0.536
gw.448.64.1 Branchiostoma floridae gw.448.64.1 I 0.450
gw.46.292.1 Branchiostoma floridae gw.46.292.1 I 0.450
Hba_18941 Heterorhabditis bacteriophora Hba_18941 I 0.481
HHAL000065-PA Halyomorpha halys HHAL000065-PA I 0.444
HMEL012996 Heliconius melpomene HMEL012996 I 0.694
Hsal_01854--XP_624175.2_APIME Harpegnathos saltator Hsal_01854--XP_624175.2_APIME I 0.658
Hsal_08911--XP_624175.2_APIME Harpegnathos saltator Hsal_08911--XP_624175.2_APIME I 0.450
ISCW010061 Ixodes scapularis ISCW010061 I 0.691
KGM_16790 Danaus plexippus KGM_16790 I 0.625
KGM_16941 Danaus plexippus KGM_16941 I 0.450
L596_g5739 Steinernema carpocapsae L596_g5739 I 0.487
L798_02329 Zootermopsis nevadensis L798_02329 I 0.692
L798_08623 Zootermopsis nevadensis L798_08623 I 0.444
L889_g11174 Steinernema feltiae L889_g11174 I 0.487
L892_g3879 Steinernema scapterisci L892_g3879 I 0.479
L893_g26751 Steinernema glaseri L893_g26751 I 0.487
L898_g8837 Steinernema monticolum L898_g8837 I 0.487
LCUP006498 Lucilia cuprina LCUP006498 I 0.702
LCUP009387 Lucilia cuprina LCUP009387 I 0.417
LDEC000948 Leptinotarsa decemlineata LDEC000948 I 0.564
LLOJ007756 Lutzomyia longipalpis LLOJ007756 I 0.455
LOAG_17202 Loa loa LOAG_17202 I 0.479
LotgiG89909 Lottia gigantea LotgiG89909 I 0.579
MCINX015089 Melitaea cinxia MCINX015089 I 0.450
MDOA004531 Musca domestica MDOA004531 I 0.417
MDOA012813 Musca domestica MDOA012813 I 0.709
Myotis_brandtii_BBX_10016000 Myotis brandtii Myotis_brandtii_BBX_10016000 I 0.544
Myotis_brandtii_Cic_10007129 Myotis brandtii Myotis_brandtii_Cic_10007129 I 0.450
nAv.1.0.1.g00032 Acanthocheilonema viteae nAv.1.0.1.g00032 I 0.474
nDi.2.2.2.g01012 Dirofilaria immitis nDi.2.2.2.g01012 I 0.479
nLs.2.1.2.g07996 Litomosoides sigmodontis nLs.2.1.2.g07996 I 0.479
nOo.2.0.1.g00287 Onchocerca ochengi nOo.2.0.1.g00287 I 0.479
NV10910 Nasonia vitripennis NV10910 I 0.450
Ocbimv22001036m.g Octopus bimaculoides Ocbimv22001036m.g I 0.504
Ocbimv22037932m.g Octopus bimaculoides Ocbimv22037932m.g I 0.450
OESDEN_00065 Oesophagostomum dentatum OESDEN_00065 I 0.481
OFLC_0001331401 Onchocerca flexuosa OFLC_0001331401 I 0.479
Ogr10275 Ophisaurus gracilis Ogr10275 I 0.450
Ogr11041 Ophisaurus gracilis Ogr11041 I 0.536
PHUM079880 Pediculus humanus PHUM079880 I 0.450
PHUM230960 Pediculus humanus PHUM230960 I 0.504
POSPLDRAFT_104619 Postia placenta POSPLDRAFT_104619 I 0.443
POSPLDRAFT_98507 Postia placenta POSPLDRAFT_98507 I 0.443
PTRK_0000169700 Parastrongyloides trichosuri PTRK_0000169700 I 0.446
Pvit_02469 Pogona vitticeps Pvit_02469 I 0.536
Pvit_02876 Pogona vitticeps Pvit_02876 I 0.450
RPRC001090 Rhodnius prolixus RPRC001090 I 0.444
RSKR_0000077800 Rhabditophanes kr3021 RSKR_0000077800 I 0.415
Sakowv30039572m.g Saccoglossus kowalevskii Sakowv30039572m.g I 0.568
Sakowv30042695m.g Saccoglossus kowalevskii Sakowv30042695m.g I 0.450
SBAD_0000026401 Soboliphyme baturini SBAD_0000026401 I 0.453
scaffold4-EXSNAP2012.129 Pristionchus exspectatus scaffold4-EXSNAP2012.129 I 0.439
SCUD_0001673101 Schistosoma curassoni SCUD_0001673101 I 0.485
SINV12425 Solenopsis invicta SINV12425 I 0.626
Sjc_0093980 Schistosoma japonicum Sjc_0093980 I 0.485
SMAR009315 Strigamia maritima SMAR009315 I 0.450
SMAR012744 Strigamia maritima SMAR012744 I 0.590
Smp_142600 Schistosoma mansoni Smp_142600 I 0.478
SMU15002098 Schmidtea mediterranea SMU15002098 I 0.433
SMUV_0001072601 Syphacia muris SMUV_0001072601 I 0.442
SPAL_0001296500 Strongyloides papillosus SPAL_0001296500 I 0.446
SPU_025292 Strongylocentrotus purpuratus SPU_025292 I 0.450
SSTP_0000494800 Strongyloides stercoralis SSTP_0000494800 I 0.446
SVE_0052600 Strongyloides venezuelensis SVE_0052600 I 0.446
SVUK_0000932601 Strongylus vulgaris SVUK_0000932601 I 0.476
T265_01499 Opisthorchis viverrini T265_01499 I 0.436
Tal_R013114 Tyto alba Tal_R013114 I 0.539
TC004697 Tribolium castaneum TC004697 I 0.450
TC007499 Tribolium castaneum TC007499 I 0.604
TCLT_0000608401 Thelazia callipaeda TCLT_0000608401 I 0.479
tetur21g00740 Tetranychus urticae tetur21g00740 I 0.442
TMUE_s0223001200 Trichuris muris TMUE_s0223001200 I 0.444
TTRE_0000098801 Trichuris trichiura TTRE_0000098801 I 0.444
gei-3 Caenorhabditis elegans WBGene00001560 D 0.476
WBGene00241539 Onchocerca volvulus WBGene00241539 I 0.479
WUBG_04884 Wuchereria bancrofti WUBG_04884 I 0.479
cic Xenopus tropicalis XB-GENE-6467430 I 0.450
bbx.L Xenopus laevis XB-GENE-981431 I 0.539
XP_002932333 Xenopus tropicalis XP_002932333 I 0.539
YQE_03282 Dendroctonus ponderosae YQE_03282 I 0.442
YQE_06837 Dendroctonus ponderosae YQE_06837 I 0.564