Thaps5285 (Thalassiosira pseudonana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Thaps5285 T332938_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps5285 Sox 86 108
Thaps5285 Sox 136 189

Links

Other Sox family TFs
Other Thalassiosira pseudonana TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.536
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.519
Thaps12024 Thalassiosira pseudonana Thaps12024 N 0.516
Thaps22889 Thalassiosira pseudonana Thaps22889 N 0.511
fgenesh2_pg.9_#_353 Fragilariopsis cylindrus fgenesh2_pg.9_#_353 N 0.489
estExt_Genewise1Plus.C_70298 Fragilariopsis cylindrus estExt_Genewise1Plus.C_70298 N 0.489
Phatr3_J39045 Phaeodactylum tricornutum Phatr3_J39045 N 0.488
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.488
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.484
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.481
Thaps4076 Thalassiosira pseudonana Thaps4076 N 0.479
Thaps4075 Thalassiosira pseudonana Thaps4075 N 0.479
fgenesh2_pg.4_#_1036 Fragilariopsis cylindrus fgenesh2_pg.4_#_1036 N 0.464
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.463
estExt_fgenesh2_kg.C_130080 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_130080 N 0.462
Thaps25909 Thalassiosira pseudonana Thaps25909 N 0.453
NCLIV_023590 Neospora caninum NCLIV_023590 N 0.453
Thaps24954 Thalassiosira pseudonana Thaps24954 N 0.453
Thaps10099 Thalassiosira pseudonana Thaps10099 N 0.453
Thapsdraft651 Thalassiosira pseudonana Thapsdraft651 N 0.451
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.448
Phatr3_J48554 Phaeodactylum tricornutum Phatr3_J48554 N 0.441
Phatr3_J42576 Phaeodactylum tricornutum Phatr3_J42576 N 0.440
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N 0.440
XP_002490100.1 Pichia pastoris XP_002490100.1 N 0.440
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.439
fgenesh2_pg.9_#_75 Fragilariopsis cylindrus fgenesh2_pg.9_#_75 N 0.439
MAM_05902 Metarhizium album MAM_05902 N 0.439
Phatr3_J49938 Phaeodactylum tricornutum Phatr3_J49938 N 0.438
TGME49_081900 Toxoplasma gondii TGME49_081900 N 0.428
Thaps23446 Thalassiosira pseudonana Thaps23446 N 0.427
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N 0.427
Thapsdraft1840 Thalassiosira pseudonana Thapsdraft1840 N 0.427
fgenesh2_pg.7_#_214 Fragilariopsis cylindrus fgenesh2_pg.7_#_214 N 0.419
XP_002492281.1 Pichia pastoris XP_002492281.1 N 0.415
Thaps22372 Thalassiosira pseudonana Thaps22372 N 0.415
PAS_chr3_1149 Komagataella pastoris PAS_chr3_1149 N 0.415