TPHA_0P00560 (Tetrapisispora phaffii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 TPHA_0P00560 T332969_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP10
M00068_2.00 		Saccharomyces cerevisiae
TCCCCGGC
GCCGGGGA		 PBM
Badis et al.(2008)
NHP10_2069 		0.563 0.662
NHP10
M07496_2.00 		Saccharomyces cerevisiae
YCCCCGGY
RCCGGGGR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1 		0.563 0.662
NHP10
M08604_2.00 		Saccharomyces cerevisiae
TCCCCGGY
RCCGGGGA		 Misc
DeBoer et al.(2011)
YDL002C_502 		0.563 0.662
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCE66214 Sox 94 158

Links

Other Sox family TFs
Other Tetrapisispora phaffii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Kpol_1045p57 Vanderwaltozyma polyspora Kpol_1045p57 I 0.641
NCAS_0A10110 Naumovozyma castellii NCAS_0A10110 I 0.590
Scas_Contig482.3 Saccharomyces castellii Scas_Contig482.3 I 0.590
CAGL0M10505g Candida glabrata CAGL0M10505g I 0.578
TBLA_0A00160 Tetrapisispora blattae TBLA_0A00160 I 0.577
3735_YDL002C Saccharomyces paradoxus 3735_YDL002C I 0.563
NHP10 Saccharomyces cerevisiae YDL002C D 0.563
SKUD_167206 Saccharomyces kudriavzevii SKUD_167206 I 0.563
603_YDL002C Saccharomyces bayanus 603_YDL002C I 0.563
NDAI_0A07360 Naumovozyma dairenensis NDAI_0A07360 I 0.563
3225_YDL002C Saccharomyces mikatae 3225_YDL002C I 0.563
KNAG_0K01480 Kazachstania naganishii KNAG_0K01480 I 0.551
KAFR_0F02510 Kazachstania africana KAFR_0F02510 I 0.542
ZBAI_07968 Zygosaccharomyces bailii ZBAI_07968 I 0.535
ZBAI_02112 Zygosaccharomyces bailii ZBAI_02112 I 0.535
ZYRO0A04378g Zygosaccharomyces rouxii ZYRO0A04378g I 0.535
TDEL_0D04120 Torulaspora delbrueckii TDEL_0D04120 I 0.534
Ecym_5292 Eremothecium cymbalariae Ecym_5292 I 0.429
AACERI_AaceriAEL005C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL005C I 0.429
YALI0_D17996g Yarrowia lipolytica YALI0_D17996g N 0.426
AGOS_AEL005C Ashbya gossypii AGOS_AEL005C N 0.423