Traes_5DL_BCFE39D13 (Triticum aestivum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Traes_5DL_BCFE39D13 T332999_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_5DL_BCFE39D13.2 Sox 1 45

Links

Other Sox family TFs
Other Triticum aestivum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_24487 Aegilops tauschii F775_24487 N 0.577
cassava14282.m1 Manihot esculenta cassava14282.m1 N 0.506
TRIUR3_05701 Triticum urartu TRIUR3_05701 N 0.502
OLONG_013579 Oryza longistaminata OLONG_013579 N 0.496
Traes_7DL_0CEFCB39D Triticum aestivum Traes_7DL_0CEFCB39D N 0.495
Traes_7AL_364A6E96F Triticum aestivum Traes_7AL_364A6E96F N 0.495
PDK_20s1781681g001 Phoenix dactylifera PDK_20s1781681g001 N 0.491
SBAD_0001127201 Soboliphyme baturini SBAD_0001127201 N 0.479
Traes_7BL_F45C15FA2 Triticum aestivum Traes_7BL_F45C15FA2 N 0.467
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.453
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.448
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.448
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.442
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.442
Si007288m.g Setaria italica Si007288m.g I 0.435
MDP0000242568 Malus domestica MDP0000242568 I 0.430
gene00778-v1.0-hybrid Fragaria vesca gene00778-v1.0-hybrid N 0.429
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.427
PGSC0003DMG400008501 Solanum tuberosum PGSC0003DMG400008501 I 0.427
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.427
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.418
GPLIN_001054700 Globodera pallida GPLIN_001054700 N 0.418
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I 0.417
SMU15030327 Schmidtea mediterranea SMU15030327 N 0.417