Traes_6BS_165C5AFD9 (Triticum aestivum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Traes_6BS_165C5AFD9 T333006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_6BS_165C5AFD9.1 Sox 131 198

Links

Other Sox family TFs
Other Triticum aestivum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BTMF_0000256101 Brugia timori BTMF_0000256101 N 0.433
chr5.CM0260.560.nd Lotus japonicus chr5.CM0260.560.nd N 0.510
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.422
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.424
Eucgr.F01991 Eucalyptus grandis Eucgr.F01991 N 0.496
F775_20402 Aegilops tauschii F775_20402 N 0.708
MLOC_42821 Hordeum vulgare MLOC_42821 I 0.737
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.421
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.421
PDK_20s1331851g001 Phoenix dactylifera PDK_20s1331851g001 N 0.491
PDK_20s1400562g001 Phoenix dactylifera PDK_20s1400562g001 N 0.577
PGSC0003DMG402018896 Solanum tuberosum PGSC0003DMG402018896 N 0.516
POPTR_0017s08230 Populus trichocarpa POPTR_0017s08230 N 0.594
Traes_6DS_C7F653F0F Triticum aestivum Traes_6DS_C7F653F0F N 0.708
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.421