Traes_6DL_F46673879 (Triticum aestivum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Traes_6DL_F46673879 T333010_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_6DL_F46673879.2 Sox 29 63

Links

Other Sox family TFs
Other Triticum aestivum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.616
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.600
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.574
SapurV1A.0491s0160 Salix purpurea SapurV1A.0491s0160 N 0.498
Traes_1DL_ED7FDC748 Triticum aestivum Traes_1DL_ED7FDC748 N 0.487
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.467
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.465
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.462
AC186524.3_FG005 Zea mays AC186524.3_FG005 N 0.461
Bra012244 Brassica rapa Bra012244 N 0.455
Bra016455 Brassica rapa Bra016455 N 0.455
Cucsa.047620 Cucumis sativus Cucsa.047620 N 0.446
PK25712.1 Cannabis sativa PK25712.1 N 0.440
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.435
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.435
GLYMA02G25940 Glycine max GLYMA02G25940 N 0.433
L798_09360 Zootermopsis nevadensis L798_09360 N 0.430
L798_04020 Zootermopsis nevadensis L798_04020 N 0.430
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I 0.426
GRMZM2G324727 Zea mays GRMZM2G324727 N 0.423
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.423
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.423
Si007288m.g Setaria italica Si007288m.g I 0.423
BGLB013489 Biomphalaria glabrata BGLB013489 N 0.420
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.418