WALSEDRAFT_53977 (Wallemia sebi)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 WALSEDRAFT_53977 T333259_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NHP6A
M01566_2.00
Saccharomyces cerevisiae
NHRYWWWN

NWWWRYDN
PBM
Zhu et al.(2009)
Nhp6a
0.505 0.609
NHP6A
M08606_2.00
Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN

NHNNHYWHTATATAWNNDHNH
Misc
DeBoer et al.(2011)
YPR052C_879
0.505 0.609
NHP6B
M01565_2.00
Saccharomyces cerevisiae
NNWHWRYDNN

NNHRYWDWNN
PBM
Zhu et al.(2009)
Nhp6b
0.498 0.565
NHP6B
M08603_2.00
Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN

NHNYWWWWTATAWWNDDAND
Misc
DeBoer et al.(2011)
YBR089C-A_792
0.498 0.565
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EIM22724 Sox 25 93

Links

Other Sox family TFs
Other Wallemia sebi TFs

Invalid Input OrderBy

325 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action