CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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hmg-5
(
Caenorhabditis elegans
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
WBGene00001975
T333271_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F45E4.9
Sox
33
91
NINPYAMFIKENFKANTSDMKRTDLMKELSGKWKALSISEKDKYTELSKNYNAQKLDDF
F45E4.9
Sox
132
195
PSVPPSAYALFIKEKLSGAGMESKEKMKEAVAQWKAFTDSQKKKYTDEAKKLKDEYHVVLQKWE
Links
Other
Sox
family TFs
Other
Caenorhabditis elegans
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE12728
Caenorhabditis remanei
CRE12728
N
0.528
CRE31648
Caenorhabditis remanei
CRE31648
N
0.509