swsn-3 (Caenorhabditis elegans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 WBGene00022182 T333280_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Y71H2AM.17 Sox 26 94

Links

Other Sox family TFs
Other Caenorhabditis elegans TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG09815 Caenorhabditis briggsae CBG09815 N 0.728
CBN09141 Caenorhabditis brenneri CBN09141 N 0.690
CRE25200 Caenorhabditis remanei CRE25200 N 0.690
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.610
NECAME_16117 Necator americanus NECAME_16117 N 0.610
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.610
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.610
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.610
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.610
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.610
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.610
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.610
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.610
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.610
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.610
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.610
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.610
CJA12494 Caenorhabditis japonica CJA12494 N 0.591
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.551
scaffold237-EXSNAP2012.36 Pristionchus exspectatus scaffold237-EXSNAP2012.36 N 0.541
PPA02543 Pristionchus pacificus PPA02543 N 0.541
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.537
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.530
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.530
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.530
LOAG_01279 Loa loa LOAG_01279 N 0.530
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.530
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.530
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.530
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.530
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.530
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.530
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.530
Bm7076 Brugia malayi Bm7076 N 0.530
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 N 0.528
Minc14081 Meloidogyne incognita Minc14081 N 0.528
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.528
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.505
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.505
ASU_02248 Ascaris suum ASU_02248 N 0.505
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.505
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.505
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.483
Hba_20635 Heterorhabditis bacteriophora Hba_20635 N 0.467
GPLIN_000239300 Globodera pallida GPLIN_000239300 N 0.463
L898_g375 Steinernema monticolum L898_g375 N 0.458
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.457
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.457
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.457
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.457
GB50847 Apis mellifera GB50847 N 0.457
TC007745 Tribolium castaneum TC007745 N 0.457
L798_00593 Zootermopsis nevadensis L798_00593 N 0.457
NV11999 Nasonia vitripennis NV11999 N 0.457
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.457
ACEP21543 Atta cephalotes ACEP21543 N 0.457
L892_g30100 Steinernema scapterisci L892_g30100 N 0.456
L596_g22461 Steinernema carpocapsae L596_g22461 N 0.456
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N 0.454
HMEL010720 Heliconius melpomene HMEL010720 N 0.453
KGM_12870 Danaus plexippus KGM_12870 N 0.453
AAH41216 Xenopus laevis AAH41216 N 0.451
HelroG188630 Helobdella robusta HelroG188630 N 0.451
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.450
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.448
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.445
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.444
Bm12451 Brugia malayi Bm12451 N 0.444
CapteG156119 Capitella teleta CapteG156119 N 0.444
CLEC001104 Cimex lectularius CLEC001104 N 0.444
LotgiG111061 Lottia gigantea LotgiG111061 N 0.444
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.442
smarce1 Oryzias latipes ENSORLG00000018629 N 0.442
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.442
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.442
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.442
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.442
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N 0.442
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.442
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.442
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.442
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.441
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.439
SMAR004982 Strigamia maritima SMAR004982 N 0.437
CJA31291 Caenorhabditis japonica CJA31291 N 0.436
ISCW021016 Ixodes scapularis ISCW021016 N 0.436
CLEC009203 Cimex lectularius CLEC009203 N 0.436
HHAL007378-PA Halyomorpha halys HHAL007378-PA N 0.433
TriadG53566 Trichoplax adhaerens TriadG53566 N 0.430
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N 0.427
AAEL010903 Aedes aegypti AAEL010903 N 0.427
CPIJ007400 Culex quinquefasciatus CPIJ007400 N 0.427
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N 0.427
CPIJ018416 Culex quinquefasciatus CPIJ018416 N 0.427
ENSPPYG00000012585 Pongo abelii ENSPPYG00000012585 N 0.426
BGIBMGA009228 Bombyx mori BGIBMGA009228 N 0.421
L889_g3706 Steinernema feltiae L889_g3706 N 0.420
ENSGGOG00000024929 Gorilla gorilla ENSGGOG00000024929 N 0.417