NHP10 (Saccharomyces cerevisiae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 YDL002C T333321_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NHP10
M00068_2.00
Saccharomyces cerevisiae
TCCCCGGC

GCCGGGGA
PBM
Badis et al.(2008)
NHP10_2069
(Direct) (Direct)
NHP10
M07496_2.00
Saccharomyces cerevisiae
YCCCCGGY

RCCGGGGR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1
(Direct) (Direct)
NHP10
M08604_2.00
Saccharomyces cerevisiae
TCCCCGGY

RCCGGGGA
Misc
DeBoer et al.(2011)
YDL002C_502
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.415 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00068_2.00 Sox 51 115

DNA Binding Domains

Protein ID Domain From To Sequence
YDL002C Sox 94 158

Links

Other Sox family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action