HMO1 (Saccharomyces cerevisiae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 YDR174W T333322_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA binding activity, bending; double-stranded DNA binding activity; and four-way junction DNA binding activity. Involved in several processes, including chromosome organization; regulation of transcription, DNA-templated; and transcriptional start site selection at RNA polymerase II promoter. Located in cytosol; nucleolus; and rDNA heterochromatin. Part of small-subunit processome. Colocalizes with chromatin. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMO1
M11344_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$_HMO1_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
YDR174W Sox 106 179

Links

Other Sox family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action