YQE_03203 (Dendroctonus ponderosae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 YQE_03203 T333332_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENN80368 Sox 620 690
ENN80368 Sox 711 777

Links

Other Sox family TFs
Other Dendroctonus ponderosae TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.686
PHUM006290 Pediculus humanus PHUM006290 N 0.638
SINV22586 Solenopsis invicta SINV22586 N 0.625
ACEP16613 Atta cephalotes ACEP16613 N 0.625
NV15664 Nasonia vitripennis NV15664 N 0.622
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.621
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.621
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.620
AMAM015540 Anopheles maculatus AMAM015540 N 0.612
AMEC021909 Anopheles melas AMEC021909 N 0.612
AMIN005344 Anopheles minimus AMIN005344 N 0.612
AFUN010134 Anopheles funestus AFUN010134 N 0.612
AMEM017336 Anopheles merus AMEM017336 N 0.612
AALB006743 Anopheles albimanus AALB006743 N 0.612
ASIS000124 Anopheles sinensis ASIS000124 N 0.612
AARA010318 Anopheles arabiensis AARA010318 N 0.612
AATE018776 Anopheles atroparvus AATE018776 N 0.612
ACUA021022 Anopheles culicifacies ACUA021022 N 0.612
ADIR011701 Anopheles dirus ADIR011701 N 0.612
AFAF003948 Anopheles farauti AFAF003948 N 0.612
AGAP000005 Anopheles gambiae AGAP000005 N 0.612
AAEL011380 Aedes aegypti AAEL011380 N 0.612
ADAC001494 Anopheles darlingi ADAC001494 N 0.612
AEPI002924 Anopheles epiroticus AEPI002924 N 0.609
GJ19445 Drosophila virilis FBgn0206588 N 0.598
GK25058 Drosophila willistoni FBgn0227017 N 0.598
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.595
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.595
Dsp1 Drosophila melanogaster FBgn0011764 N 0.594
GE17263 Drosophila yakuba FBgn0234741 N 0.594
GI10980 Drosophila mojavensis FBgn0133743 N 0.594
GG17955 Drosophila erecta FBgn0110175 N 0.594
GF19115 Drosophila ananassae FBgn0096126 N 0.594
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.594
GD17278 Drosophila simulans FBgn0188840 N 0.594
GH12282 Drosophila grimshawi FBgn0119761 N 0.594
LCUP007363 Lucilia cuprina LCUP007363 N 0.592
GB47828 Apis mellifera GB47828 N 0.591
HMEL007340 Heliconius melpomene HMEL007340 N 0.590
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.578
MDOA008812 Musca domestica MDOA008812 N 0.578
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.558
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.546
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.543
CapteG158220 Capitella teleta CapteG158220 N 0.540
SMAR013695 Strigamia maritima SMAR013695 N 0.539
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.536
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.523
ISCW017350 Ixodes scapularis ISCW017350 N 0.523
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.522
HelroG87827 Helobdella robusta HelroG87827 N 0.509
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.509
ADIR000367 Anopheles dirus ADIR000367 N 0.508
ASIS009950 Anopheles sinensis ASIS009950 N 0.503
D915_00818 Fasciola hepatica D915_00818 N 0.503
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.501
AATE010886 Anopheles atroparvus AATE010886 N 0.498
csin112095 Clonorchis sinensis csin112095 N 0.495
hmgb2a Danio rerio ENSDARG00000029722 N 0.492
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.491
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.486
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.486
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.482
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.481
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.479
RPRC006379 Rhodnius prolixus RPRC006379 N 0.478
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.477
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.477
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.476
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.475
T265_10726 Opisthorchis viverrini T265_10726 N 0.472
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.471
AAI68534 Xenopus tropicalis AAI68534 N 0.463
HelroG157878 Helobdella robusta HelroG157878 N 0.462
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.460
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.459
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.456
Smp_100090 Schistosoma mansoni Smp_100090 N 0.456
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.456
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.453
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.453
TsM_000115400 Taenia solium TsM_000115400 N 0.453
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.453
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.453
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N 0.451
T265_12733 Opisthorchis viverrini T265_12733 N 0.451
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.451
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.451
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.451
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.451
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.451
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.451
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.451
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.451
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.451
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.451
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.450
A_00070 Schistosoma haematobium A_00070 N 0.450
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.450
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.450
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.450
ENSCJAG00000004401 Callithrix jacchus ENSCJAG00000004401 N 0.448
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.447
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.446
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.446
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.446
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.446
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.445
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.445
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.445
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.445
Smp_000980 Schistosoma mansoni Smp_000980 N 0.445
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.445
MCINX009638 Melitaea cinxia MCINX009638 N 0.445
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.444
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.444
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.444
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.444
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.444
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.443
L889_g13533 Steinernema feltiae L889_g13533 N 0.442
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.441
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.441
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.440
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N 0.440
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.439
Bm4180 Brugia malayi Bm4180 N 0.439
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.439
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.439
ASU_03902 Ascaris suum ASU_03902 N 0.439
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.439
nLs.2.1.2.g00300 Litomosoides sigmodontis nLs.2.1.2.g00300 N 0.439
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.439
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.439
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.439
LOAG_04936 Loa loa LOAG_04936 N 0.439
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.439
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.439
hmgb3b Danio rerio ENSDARG00000006408 N 0.438
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.437
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.437
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.437
L893_g5947 Steinernema glaseri L893_g5947 N 0.437
L892_g17551 Steinernema scapterisci L892_g17551 N 0.437
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N 0.436
hmgb1a Danio rerio ENSDARG00000099175 N 0.436
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.436
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.436
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N 0.436
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.435
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.435
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.435
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.435
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.435
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.434
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N 0.434
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.434
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N 0.433
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.432
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.432
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N 0.430
Minc03268 Meloidogyne incognita Minc03268 N 0.430
Minc08988 Meloidogyne incognita Minc08988 N 0.430
AAC59859 Xenopus laevis AAC59859 N 0.429
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.429
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.429
AAH73449 Xenopus laevis AAH73449 N 0.429
ENSPANG00000023341 Papio anubis ENSPANG00000023341 N 0.428
BGLB010942 Biomphalaria glabrata BGLB010942 N 0.427
ENSOGAG00000010941 Otolemur garnettii ENSOGAG00000010941 N 0.427
TRE_0000506801 Trichobilharzia regenti TRE_0000506801 N 0.427
BAA06440 Xenopus laevis BAA06440 N 0.426
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.426
D917_01254 Trichinella nativa D917_01254 N 0.425
EFV57410 Trichinella spiralis EFV57410 N 0.425
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.424
EFV53345 Trichinella spiralis EFV53345 N 0.423
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.422
AAH44009 Xenopus laevis AAH44009 N 0.422
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.421
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.421
ENSTBEG00000005874 Tupaia belangeri ENSTBEG00000005874 N 0.420
ENSOGAG00000028007 Otolemur garnettii ENSOGAG00000028007 N 0.419
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.419
NECAME_09126 Necator americanus NECAME_09126 N 0.418
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N 0.418
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.418
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.418
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.418
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.418
ENSCSAG00000015385 Chlorocebus sabaeus ENSCSAG00000015385 N 0.418
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.418
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.418
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.417
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.417
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N 0.416
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.415
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.415
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.415
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.415
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.415
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.415
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.415
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.415
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.415
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.415
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.415
hmgb2b Gasterosteus aculeatus ENSGACG00000001173 N 0.415
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.415
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.415
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.415
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.415
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.415
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.415