CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LinJ.29.0890
(
Leishmania infantum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
LinJ.29.0890
T333441_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LinJ.29.0890
Sox
116
184
PKGALSPYIIFVNENREKLKAKHPDMKNTDLLSEMGNLWKKASEEEKSRYQKLADEDKLRYDREMAAYI
LinJ.29.0890
Sox
210
273
PKRALTAYFFFASDYRAKHANIPAKQQMSEAGAAWGKMSAEEKKPYEELAAKDKKRYEAECSGR
Links
Other
Sox
family TFs
Other
Leishmania infantum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LmjF.29.0850
Leishmania major
LmjF.29.0850
N
0.741
LmxM.08_29.0850
Leishmania mexicana
LmxM.08_29.0850
N
0.722
LbrM.29.0880
Leishmania braziliensis
LbrM.29.0880
N
0.706