Alligator_sinensis_CCG010545.1 (Alligator sinensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Alligator_sinensis_CCG010545.1 T333565_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN

NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.555 0.667
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG010545.1 Sox 104 172

Links

Other Sox family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action