CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cflo_06149--XP_001122099.1_APIME
(
Camponotus floridanus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Cflo_06149--XP_001122099.1_APIME
T333626_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_06149--XP_001122099.1_APIME
Sox
871
919
PKREPSGFALYVKQNYNSVKKEKNNMKHAEVMKILGQQFSAIKIAKKDN
Links
Other
Sox
family TFs
Other
Camponotus floridanus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP23223
Atta cephalotes
ACEP23223
N
0.695
Hsal_02240--XP_001122099.1_APIME
Harpegnathos saltator
Hsal_02240--XP_001122099.1_APIME
N
0.645
NV14872
Nasonia vitripennis
NV14872
N
0.591
CGI_10027770
Crassostrea gigas
CGI_10027770
N
0.505
V565_033960
Rhizoctonia solani
V565_033960
N
0.501
TC012902
Tribolium castaneum
TC012902
N
0.498
LDEC009506
Leptinotarsa decemlineata
LDEC009506
N
0.495
DAPPUDRAFT_306626
Daphnia pulex
DAPPUDRAFT_306626
N
0.473
LotgiG105193
Lottia gigantea
LotgiG105193
N
0.471
CAOG_02676
Capsaspora owczarzaki
CAOG_02676
N
0.470
L804_03818
Cryptococcus gattii
L804_03818
N
0.458
fgenesh2_pg.scaffold_5000103
Monosiga brevicollis
fgenesh2_pg.scaffold_5000103
N
0.458
ACYPI006465
Acyrthosiphon pisum
ACYPI006465
N
0.449
SJAG_02223
Schizosaccharomyces japonicus
SJAG_02223
N
0.445
CNG00580
Cryptococcus neoformans
CNG00580
N
0.440
SOCG_00309
Schizosaccharomyces octosporus
SOCG_00309
N
0.437
XP_002163918.1
Hydra magnipapillata
XP_002163918.1
I
0.424