ENSBTAP00000044156-D1 (Bos grunniens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 ENSBTAP00000044156-D1 T333680_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hbp1
M00194_2.00
Mus musculus
NNNDDNNN

NNNHHNNN
PBM
Badis et al.(2009)
Hbp1_2241
0.741 1.000
HBP1
M11299_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HBP1_Q2
0.741 1.000
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000044156-D1 Sox 432 499

Links

Other Sox family TFs
Other Bos grunniens TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PITG_10442 Phytophthora infestans PITG_10442 N 0.000
fgenesh_scip_prom.28083.450 Phytophthora lateralis fgenesh_scip_prom.28083.450 N 0.000
F443_04436 Phytophthora parasitica F443_04436 N 0.000
Phyra82063 Phytophthora ramorum Phyra82063 N 0.000