CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hsal_00538--XP_001120264.1_APIME
(
Harpegnathos saltator
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Hsal_00538--XP_001120264.1_APIME
T333749_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hsal_00538--XP_001120264.1_APIME
Sox
549
615
PKRPPTAFMLWLNNARESIKADNPGIAVTEIAKKGGEMWRELKDKPEWEAKAAKAKEEYMMSMKEYE
Links
Other
Sox
family TFs
Other
Harpegnathos saltator
TFs
163 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.670
GB54571
Apis mellifera
GB54571
N
0.643
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.627
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.627
L798_13679
Zootermopsis nevadensis
L798_13679
N
0.610
TC012866
Tribolium castaneum
TC012866
N
0.608
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.597
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.597
KGM_13851
Danaus plexippus
KGM_13851
N
0.590
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.585
MDOA007633
Musca domestica
MDOA007633
N
0.579
HMEL015307
Heliconius melpomene
HMEL015307
N
0.573
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.573
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.571
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.568
GM15692
Drosophila sechellia
FBgn0170608
I
0.566
GG20749
Drosophila erecta
FBgn0112936
I
0.566
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.566
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.566
GD25171
Drosophila simulans
FBgn0196483
I
0.566
HmgZ
Drosophila yakuba
FBgn0068145
I
0.566
GK15658
Drosophila willistoni
FBgn0217663
I
0.566
AAEL011425
Aedes aegypti
AAEL011425
I
0.565
GH20784
Drosophila grimshawi
FBgn0128247
I
0.561
GL17523
Drosophila persimilis
FBgn0155126
I
0.561
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.561
MDOA014797
Musca domestica
MDOA014797
I
0.555
GG19998
Drosophila erecta
FBgn0112197
N
0.552
GE11532
Drosophila yakuba
FBgn0229332
N
0.552
GJ21774
Drosophila virilis
FBgn0208892
N
0.552
GH21151
Drosophila grimshawi
FBgn0128613
N
0.551
GI18750
Drosophila mojavensis
FBgn0141489
N
0.551
GF12460
Drosophila ananassae
FBgn0089497
N
0.547
GD25013
Drosophila simulans
FBgn0196325
N
0.547
GK22092
Drosophila willistoni
FBgn0224077
N
0.547
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.547
LCUP005047
Lucilia cuprina
LCUP005047
N
0.543
GF11622
Drosophila ananassae
FBgn0088662
I
0.539
GI20867
Drosophila mojavensis
FBgn0143601
I
0.534
GJ20604
Drosophila virilis
FBgn0207743
I
0.534
AARA003413
Anopheles arabiensis
AARA003413
N
0.520
AGAP012334
Anopheles gambiae
AGAP012334
N
0.520
AQUA002990
Anopheles quadriannulatus
AQUA002990
N
0.520
ADAC005122
Anopheles darlingi
ADAC005122
N
0.520
AMAM007083
Anopheles maculatus
AMAM007083
N
0.520
ACHR003270
Anopheles christyi
ACHR003270
N
0.520
AMEC017787
Anopheles melas
AMEC017787
N
0.520
AALB010797
Anopheles albimanus
AALB010797
N
0.520
AFUN009599
Anopheles funestus
AFUN009599
N
0.520
ADIR000495
Anopheles dirus
ADIR000495
N
0.520
AEPI002535
Anopheles epiroticus
AEPI002535
N
0.520
ACOM026236
Anopheles coluzzii
ACOM026236
N
0.520
MDOA009531
Musca domestica
MDOA009531
N
0.513
ACEP16595
Atta cephalotes
ACEP16595
I
0.512
CpipJ_CPIJ002952
Culex pipiens
CpipJ_CPIJ002952
N
0.510
AAEL011414
Aedes aegypti
AAEL011414
N
0.510
CPIJ002952
Culex quinquefasciatus
CPIJ002952
N
0.510
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.502
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.500
GL11071
Drosophila persimilis
FBgn0148681
N
0.500
HMGB6
Vitis vinifera
VIT_10s0071g00870
I
0.496
HmgD
Drosophila yakuba
FBgn0068146
N
0.492
HmgD
Drosophila melanogaster
FBgn0004362
N
0.492
GJ21748
Drosophila virilis
FBgn0208866
N
0.492
GM15859
Drosophila sechellia
FBgn0170775
N
0.492
GH21124
Drosophila grimshawi
FBgn0128586
N
0.492
GD11622
Drosophila simulans
FBgn0183362
N
0.492
GG22136
Drosophila erecta
FBgn0114310
N
0.492
GI18728
Drosophila mojavensis
FBgn0141467
N
0.492
GM13209
Drosophila sechellia
FBgn0168140
N
0.491
AALB010796
Anopheles albimanus
AALB010796
N
0.488
ADAC005115
Anopheles darlingi
ADAC005115
N
0.488
GF13265
Drosophila ananassae
FBgn0090297
N
0.486
GK15924
Drosophila willistoni
FBgn0217926
N
0.486
LCUP016801
Lucilia cuprina
LCUP016801
N
0.481
MCINX001064
Melitaea cinxia
MCINX001064
I
0.479
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.478
AAEL002381
Aedes aegypti
AAEL002381
N
0.477
Gorai.008G147700
Gossypium raimondii
Gorai.008G147700
I
0.475
KGM_13852
Danaus plexippus
KGM_13852
I
0.474
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.474
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.473
SMAR015352
Strigamia maritima
SMAR015352
N
0.473
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.469
AMTR_s00171p00070550
Amborella trichopoda
AMTR_s00171p00070550
I
0.469
CRE03995
Caenorhabditis remanei
CRE03995
N
0.469
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.468
ML09221a
Mnemiopsis leidyi
ML09221a
N
0.466
TCM_007659
Theobroma cacao
TCM_007659
I
0.465
CLEC003860
Cimex lectularius
CLEC003860
I
0.462
CapteG172235
Capitella teleta
CapteG172235
I
0.462
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.460
GL16947
Drosophila persimilis
FBgn0154551
N
0.459
GA30453
Drosophila pseudoobscura
FBgn0264590
N
0.459
AMAG_00757
Allomyces macrogynus
AMAG_00757
N
0.458
AMAG_02260
Allomyces macrogynus
AMAG_02260
N
0.458
Minc01744
Meloidogyne incognita
Minc01744
N
0.456
Minc10016
Meloidogyne incognita
Minc10016
N
0.456
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.456
MDP0000205665
Malus domestica
MDP0000205665
I
0.455
SapurV1A.0766s0120
Salix purpurea
SapurV1A.0766s0120
I
0.455
Pm006054
Prunus mume
Pm006054
I
0.455
PRUPE_ppa026912mg
Prunus persica
PRUPE_ppa026912mg
I
0.455
MhA1_Contig2971.frz3.fgene1
Meloidogyne hapla
MhA1_Contig2971.frz3.fgene1
N
0.450
MhA1_Contig128.frz3.gene5
Meloidogyne hapla
MhA1_Contig128.frz3.gene5
N
0.450
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
0.448
ACYPI006576
Acyrthosiphon pisum
ACYPI006576
I
0.446
TsM_000111500
Taenia solium
TsM_000111500
N
0.441
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.441
XP_002159252.1
Hydra magnipapillata
XP_002159252.1
I
0.439
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.432
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.430
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.429
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.429
SMUV_0000499601
Syphacia muris
SMUV_0000499601
N
0.429
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.429
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.429
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.429
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.429
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.429
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.429
Carubv10001858m.g
Capsella rubella
Carubv10001858m.g
I
0.428
Bo2g160920
Brassica oleracea
Bo2g160920
I
0.428
Bra026498
Brassica rapa
Bra026498
I
0.428
Cagra.0086s0060
Capsella grandiflora
Cagra.0086s0060
I
0.428
Bra029371
Brassica rapa
Bra029371
I
0.428
Bo9g014140
Brassica oleracea
Bo9g014140
I
0.427
GLYMA10G43440
Glycine max
GLYMA10G43440
I
0.426
GLYMA20G23370
Glycine max
GLYMA20G23370
I
0.426
PGSC0003DMG400025304
Solanum tuberosum
PGSC0003DMG400025304
I
0.426
Cla009222
Citrullus lanatus
Cla009222
I
0.426
Cucsa.300030
Cucumis sativus
Cucsa.300030
I
0.426
NECAME_17981
Necator americanus
NECAME_17981
N
0.423
NECAME_17555
Necator americanus
NECAME_17555
N
0.423
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.423
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.423
OPUNC08G00150
Oryza punctata
OPUNC08G00150
I
0.423
OLONG_014445
Oryza longistaminata
OLONG_014445
I
0.423
OB08G10120
Oryza brachyantha
OB08G10120
N
0.423
ONIVA08G00070
Oryza nivara
ONIVA08G00070
I
0.423
OBART08G00070
Oryza barthii
OBART08G00070
I
0.423
OGLUM08G00090
Oryza glumaepatula
OGLUM08G00090
I
0.423
OS08G0101100
Oryza sativa
OS08G0101100
I
0.423
AMAM004579
Anopheles maculatus
AMAM004579
N
0.423
BGIOSGA027819
Oryza indica
BGIOSGA027819
I
0.423
ORUFI08G00080
Oryza rufipogon
ORUFI08G00080
I
0.423
BGIOSGA027814
Oryza indica
BGIOSGA027814
I
0.423
PPA14042
Pristionchus pacificus
PPA14042
N
0.421
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.421
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.419
AATE003884
Anopheles atroparvus
AATE003884
N
0.419
CRE11852
Caenorhabditis remanei
CRE11852
N
0.419
30131.m007272
Ricinus communis
30131.m007272
I
0.419
ASIS014507
Anopheles sinensis
ASIS014507
N
0.419
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.418
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.418
L893_g23503
Steinernema glaseri
L893_g23503
N
0.418
SNAPOd2T00000181001
Oikopleura dioica
SNAPOd2T00000181001
N
0.417
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.417
EDI_049480
Entamoeba dispar
EDI_049480
N
0.417
HMGB6
Populus trichocarpa
POPTR_0007s15320
I
0.417
orange1.1g026850m.g
Citrus sinensis
orange1.1g026850m.g
N
0.415
Ciclev10016587m.g
Citrus clementina
Ciclev10016587m.g
N
0.415