e_gw1.1.1250.1 (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 e_gw1.1.1250.1 T333964_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.1.1250.1 Sox 13 81
e_gw1.1.1250.1 Sox 114 182

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh2_kg.C_60249 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_60249 N 0.481
Phatr3_J24886 Phaeodactylum tricornutum Phatr3_J24886 N 0.434
Phatr3_J12674 Phaeodactylum tricornutum Phatr3_J12674 N 0.425