CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.30.104.1
(
Phycomyces blakesleeanus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
e_gw1.30.104.1
T333970_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.30.104.1
Sox
33
99
PLKPSSAYVMFSNDVRAELRSRNMTFTELAKLVGDRWKNLNHDEKQRYETNAMVARKQYQIRLEDYQ
Links
Other
Sox
family TFs
Other
Phycomyces blakesleeanus
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RO3G_15755
Rhizopus oryzae
RO3G_15755
I
0.612
fgeneshMC_pg.3_#_1190
Mucor circinelloides
fgeneshMC_pg.3_#_1190
I
0.610
RO3G_16060
Rhizopus oryzae
RO3G_16060
I
0.597
estExt_fgeneshMC_pg.C_20910
Mucor circinelloides
estExt_fgeneshMC_pg.C_20910
I
0.570
RO3G_07013
Rhizopus oryzae
RO3G_07013
I
0.563
fgeneshMC_pg.1_#_1771
Mucor circinelloides
fgeneshMC_pg.1_#_1771
I
0.559
gw1.72.30.1
Phycomyces blakesleeanus
gw1.72.30.1
I
0.548
gw1.16.190.1
Phycomyces blakesleeanus
gw1.16.190.1
N
0.533
RO3G_07543
Rhizopus oryzae
RO3G_07543
I
0.499
RO3G_09728
Rhizopus oryzae
RO3G_09728
I
0.497
MVLG_01270
Microbotryum violaceum
MVLG_01270
I
0.495
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
0.493
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
0.493
FPSE_02664
Fusarium pseudograminearum
FPSE_02664
I
0.465
SAPIO_CDS3355
Scedosporium apiospermum
SAPIO_CDS3355
I
0.463
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.460
ENSCSAVG00000001086
Ciona savignyi
ENSCSAVG00000001086
N
0.443
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.439
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.437
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.437
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.437
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.437
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.437
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.437
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.437
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.437
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.437
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.437
MAJ_04030
Metarhizium majus
MAJ_04030
I
0.433
MGU_02157
Metarhizium guizhouense
MGU_02157
I
0.433
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.433
MANI_030028
Metarhizium anisopliae
MANI_030028
I
0.433
X797_001988
Metarhizium robertsii
X797_001988
I
0.433
MBR_01483
Metarhizium brunneum
MBR_01483
I
0.433
MDOA008605
Musca domestica
MDOA008605
N
0.430
LCUP006200
Lucilia cuprina
LCUP006200
N
0.429
fgenesh2_pg.scaffold_177000008
Branchiostoma floridae
fgenesh2_pg.scaffold_177000008
N
0.426
XP_002936155
Xenopus tropicalis
XP_002936155
N
0.426
tox4.S
Xenopus laevis
XB-GENE-993810
I
0.426
fgenesh2_pg.scaffold_19000069
Branchiostoma floridae
fgenesh2_pg.scaffold_19000069
N
0.426
tox4b
Tetraodon nigroviridis
ENSTNIG00000003691
N
0.426
ENSGMOG00000008081
Gadus morhua
ENSGMOG00000008081
N
0.426
ENSGMOG00000013406
Gadus morhua
ENSGMOG00000013406
N
0.426
ENSMMUG00000014077
Macaca mulatta
ENSMMUG00000014077
N
0.426
ENSXMAG00000016763
Xiphophorus maculatus
ENSXMAG00000016763
N
0.426
ENSGGOG00000025016
Gorilla gorilla
ENSGGOG00000025016
I
0.426
tox2
Gasterosteus aculeatus
ENSGACG00000006914
N
0.426
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.426
ENSCING00000009516
Ciona intestinalis
ENSCING00000009516
N
0.426
ENSCSAVG00000009270
Ciona savignyi
ENSCSAVG00000009270
N
0.426
tox4b
Danio rerio
ENSDARG00000100163
I
0.426
ENSONIG00000016627
Oreochromis niloticus
ENSONIG00000016627
N
0.426
ENSONIG00000000284
Oreochromis niloticus
ENSONIG00000000284
N
0.426
tox2
Oryzias latipes
ENSORLG00000004818
N
0.426
tox2
Tetraodon nigroviridis
ENSTNIG00000005683
N
0.426
tox4b
Takifugu rubripes
ENSTRUG00000002594
N
0.426
tox2
Takifugu rubripes
ENSTRUG00000013848
N
0.426
ENSSSCG00000023554
Sus scrofa
ENSSSCG00000023554
N
0.426
ENSTGUG00000003811
Taeniopygia guttata
ENSTGUG00000003811
N
0.426
tox4b
Oryzias latipes
ENSORLG00000008779
N
0.426
ENSPFOG00000002336
Poecilia formosa
ENSPFOG00000002336
N
0.426
ENSPFOG00000008402
Poecilia formosa
ENSPFOG00000008402
N
0.426
PAAG_05470
Paracoccidioides sp lutzii
PAAG_05470
N
0.419
E5Q_03709
Mixia osmundae
E5Q_03709
N
0.418
D917_02150
Trichinella nativa
D917_02150
N
0.417
EFV61455
Trichinella spiralis
EFV61455
N
0.417