estExt_fgenesh2_kg.C_60249 (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_fgenesh2_kg.C_60249 T334008_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_kg.C_60249 Sox 44 112
estExt_fgenesh2_kg.C_60249 Sox 134 203

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phatr3_J24886 Phaeodactylum tricornutum Phatr3_J24886 N 0.556
e_gw1.1.1250.1 Fragilariopsis cylindrus e_gw1.1.1250.1 N 0.481