estExt_fgenesh2_pg.C_4640004 (Branchiostoma floridae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_fgenesh2_pg.C_4640004 T334025_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_4640004 Sox 189 262

Links

Other Sox family TFs
Other Branchiostoma floridae TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh2_pg.C_7290004 Branchiostoma floridae estExt_fgenesh2_pg.C_7290004 N 0.741
NEMVEDRAFT_v1g243341 Nematostella vectensis NEMVEDRAFT_v1g243341 N 0.546
LotgiG239042 Lottia gigantea LotgiG239042 N 0.442
Sakowv30030113m.g Saccoglossus kowalevskii Sakowv30030113m.g N 0.440
TriadG7110 Trichoplax adhaerens TriadG7110 N 0.431
CGI_10012576 Crassostrea gigas CGI_10012576 N 0.431