CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_7000440
(
Phanerochaete chrysosporium
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
fgenesh1_pg.C_scaffold_7000440
T334114_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_7000440
Sox
114
193
IKRPENAFILFRRKCCEDRNQAHEDPEDPAAAPVKKQRQADLSKAISQQWKSLSAEERQYWEDLAKEKKKQHEEMYPNYV
Links
Other
Sox
family TFs
Other
Phanerochaete chrysosporium
TFs
184 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PISMIDRAFT_104531
Pisolithus microcarpus
PISMIDRAFT_104531
I
0.643
DICSQDRAFT_18314
Dichomitus squalens
DICSQDRAFT_18314
N
0.641
Moror_5744
Moniliophthora roreri
Moror_5744
N
0.639
M378DRAFT_85158
Amanita muscaria
M378DRAFT_85158
N
0.632
PAXRUDRAFT_827004
Paxillus rubicundulus
PAXRUDRAFT_827004
N
0.627
SERLA73DRAFT_84266
Serpula lacrymans
SERLA73DRAFT_84266
I
0.627
FOMPIDRAFT_59166
Fomitopsis pinicola
FOMPIDRAFT_59166
I
0.620
GYMLUDRAFT_43821
Gymnopus luxurians
GYMLUDRAFT_43821
N
0.606
CERSUDRAFT_118953
Ceriporiopsis subvermispora
CERSUDRAFT_118953
N
0.604
SCHCODRAFT_255799
Schizophyllum commune
SCHCODRAFT_255799
N
0.600
Moror_6135
Moniliophthora roreri
Moror_6135
I
0.598
PAXINDRAFT_137714
Paxillus involutus
PAXINDRAFT_137714
I
0.598
PHLGIDRAFT_121875
Phlebiopsis gigantea
PHLGIDRAFT_121875
N
0.591
CY34DRAFT_811615
Suillus luteus
CY34DRAFT_811615
N
0.586
BN946_scf184844.g19
Trametes cinnabarina
BN946_scf184844.g19
N
0.586
HYDPIDRAFT_99715
Hydnomerulius pinastri
HYDPIDRAFT_99715
N
0.586
AGABI2DRAFT_179892
Agaricus bisporus
AGABI2DRAFT_179892
N
0.581
JAAARDRAFT_209433
Jaapia argillacea
JAAARDRAFT_209433
I
0.572
PILCRDRAFT_818013
Piloderma croceum
PILCRDRAFT_818013
I
0.567
FIBRA_08093
Fibroporia radiculosa
FIBRA_08093
N
0.563
GYMLUDRAFT_248699
Gymnopus luxurians
GYMLUDRAFT_248699
N
0.554
GLOTRDRAFT_98119
Gloeophyllum trabeum
GLOTRDRAFT_98119
I
0.551
CC1G_06994
Coprinopsis cinerea
CC1G_06994
I
0.526
SCHCODRAFT_255090
Schizophyllum commune
SCHCODRAFT_255090
N
0.520
PHACADRAFT_54114
Phanerochaete carnosa
PHACADRAFT_54114
N
0.515
M408DRAFT_332605
Serendipita vermifera
M408DRAFT_332605
N
0.510
M408DRAFT_328232
Serendipita vermifera
M408DRAFT_328232
N
0.510
PIIN_02385
Piriformospora indica
PIIN_02385
N
0.510
SCHCODRAFT_114945
Schizophyllum commune
SCHCODRAFT_114945
I
0.508
SCHCODRAFT_111770
Schizophyllum commune
SCHCODRAFT_111770
I
0.508
SCHCODRAFT_113446
Schizophyllum commune
SCHCODRAFT_113446
I
0.508
GYMLUDRAFT_48274
Gymnopus luxurians
GYMLUDRAFT_48274
I
0.506
fgenesh1_pg.C_scaffold_2000484
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_2000484
N
0.499
CC1G_08141
Coprinopsis cinerea
CC1G_08141
I
0.498
GALMADRAFT_133211
Galerina marginata
GALMADRAFT_133211
I
0.494
CERSUDRAFT_61596
Ceriporiopsis subvermispora
CERSUDRAFT_61596
N
0.493
Moror_17490
Moniliophthora roreri
Moror_17490
I
0.487
M422DRAFT_195883
Sphaerobolus stellatus
M422DRAFT_195883
N
0.487
GYMLUDRAFT_71519
Gymnopus luxurians
GYMLUDRAFT_71519
I
0.485
JAAARDRAFT_117714
Jaapia argillacea
JAAARDRAFT_117714
I
0.485
PTRG_10423
Pyrenophora triticirepentis
PTRG_10423
I
0.480
K437DRAFT_265905
Tilletiaria anomala
K437DRAFT_265905
I
0.480
AGABI2DRAFT_56847
Agaricus bisporus
AGABI2DRAFT_56847
N
0.479
BN946_scf184940.g27
Trametes cinnabarina
BN946_scf184940.g27
I
0.478
SCHCODRAFT_114988
Schizophyllum commune
SCHCODRAFT_114988
I
0.476
E5Q_03921
Mixia osmundae
E5Q_03921
N
0.470
RHTO_04522
Rhodosporidium toruloides
RHTO_04522
I
0.468
Ecym_1257
Eremothecium cymbalariae
Ecym_1257
I
0.467
GALMADRAFT_1187634
Galerina marginata
GALMADRAFT_1187634
N
0.466
JL09_g4172
Pichia kudriavzevii
JL09_g4172
I
0.466
M378DRAFT_12668
Amanita muscaria
M378DRAFT_12668
N
0.465
BOTBODRAFT_99971
Botryobasidium botryosum
BOTBODRAFT_99971
N
0.465
FOMPIDRAFT_1124101
Fomitopsis pinicola
FOMPIDRAFT_1124101
N
0.464
M413DRAFT_24002
Hebeloma cylindrosporum
M413DRAFT_24002
I
0.462
Moror_13342
Moniliophthora roreri
Moror_13342
I
0.462
PHACADRAFT_58554
Phanerochaete carnosa
PHACADRAFT_58554
N
0.462
M422DRAFT_267643
Sphaerobolus stellatus
M422DRAFT_267643
N
0.459
POSPLDRAFT_42762
Postia placenta
POSPLDRAFT_42762
I
0.458
GLOINDRAFT_52776
Rhizophagus irregularis
GLOINDRAFT_52776
I
0.457
SCHCODRAFT_230584
Schizophyllum commune
SCHCODRAFT_230584
I
0.456
AGOS_AAR026W
Ashbya gossypii
AGOS_AAR026W
I
0.455
PHLGIDRAFT_46949
Phlebiopsis gigantea
PHLGIDRAFT_46949
I
0.455
AACERI_AaceriAAR026W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAAR026W
I
0.455
CC1G_06427
Coprinopsis cinerea
CC1G_06427
N
0.451
NDAI_0A05180
Naumovozyma dairenensis
NDAI_0A05180
I
0.450
CC1G_11980
Coprinopsis cinerea
CC1G_11980
I
0.450
LACBIDRAFT_294333
Laccaria bicolor
LACBIDRAFT_294333
N
0.450
FIBRA_04233
Fibroporia radiculosa
FIBRA_04233
I
0.449
SAKL0F03872g
Lachancea kluyveri
SAKL0F03872g
I
0.448
AGABI2DRAFT_176060
Agaricus bisporus
AGABI2DRAFT_176060
I
0.448
SERLA73DRAFT_141654
Serpula lacrymans
SERLA73DRAFT_141654
I
0.448
KUCA_T00002521001
Kuraishia capsulata
KUCA_T00002521001
I
0.447
SCLCIDRAFT_6962
Scleroderma citrinum
SCLCIDRAFT_6962
I
0.445
PLEOSDRAFT_1081694
Pleurotus ostreatus
PLEOSDRAFT_1081694
I
0.443
GALMADRAFT_246110
Galerina marginata
GALMADRAFT_246110
I
0.443
LACBIDRAFT_293340
Laccaria bicolor
LACBIDRAFT_293340
N
0.443
K443DRAFT_94014
Laccaria amethystina
K443DRAFT_94014
N
0.443
SCHCODRAFT_238903
Schizophyllum commune
SCHCODRAFT_238903
I
0.441
Moror_2098
Moniliophthora roreri
Moror_2098
I
0.440
Moror_4096
Moniliophthora roreri
Moror_4096
I
0.440
CANTEDRAFT_136140
Candida tenuis
CANTEDRAFT_136140
I
0.439
SERLA73DRAFT_71121
Serpula lacrymans
SERLA73DRAFT_71121
I
0.438
L804_01864
Cryptococcus gattii
L804_01864
I
0.437
CNA06070
Cryptococcus neoformans
CNA06070
I
0.437
GLOINDRAFT_324308
Rhizophagus irregularis
GLOINDRAFT_324308
I
0.437
HETIRDRAFT_18788
Heterobasidion irregulare
HETIRDRAFT_18788
I
0.436
gw1.11.527.1
Heterobasidion annosum
gw1.11.527.1
I
0.436
gw1.11.531.1
Heterobasidion annosum
gw1.11.531.1
I
0.436
HETIRDRAFT_18769
Heterobasidion irregulare
HETIRDRAFT_18769
I
0.436
PGUG_05440
Candida guilliermondii
PGUG_05440
I
0.435
GYMLUDRAFT_162520
Gymnopus luxurians
GYMLUDRAFT_162520
I
0.435
CY34DRAFT_28710
Suillus luteus
CY34DRAFT_28710
I
0.435
PGUG_05440
Meyerozyma guilliermondii
PGUG_05440
I
0.435
GLOTRDRAFT_28355
Gloeophyllum trabeum
GLOTRDRAFT_28355
I
0.435
fgeneshTM_pg.4_#_200
Tremella mesenterica
fgeneshTM_pg.4_#_200
I
0.435
TriadG55419
Trichoplax adhaerens
TriadG55419
I
0.434
M413DRAFT_445326
Hebeloma cylindrosporum
M413DRAFT_445326
I
0.434
BATDEDRAFT_7668
Batrachochytrium dendrobatidis
BATDEDRAFT_7668
I
0.434
PILCRDRAFT_533337
Piloderma croceum
PILCRDRAFT_533337
I
0.433
CC1G_13994
Coprinopsis cinerea
CC1G_13994
N
0.432
CC1G_04121
Coprinopsis cinerea
CC1G_04121
I
0.432
GLOTRDRAFT_141363
Gloeophyllum trabeum
GLOTRDRAFT_141363
I
0.432
K443DRAFT_679736
Laccaria amethystina
K443DRAFT_679736
I
0.432
CC1G_03536
Coprinopsis cinerea
CC1G_03536
N
0.431
JAAARDRAFT_113690
Jaapia argillacea
JAAARDRAFT_113690
I
0.430
DACRYDRAFT_24732
Dacryopinax sp
DACRYDRAFT_24732
N
0.430
A1O3_06089
Capronia epimyces
A1O3_06089
I
0.430
J056_002105
Wallemia ichthyophaga
J056_002105
N
0.429
PTRG_11789
Pyrenophora triticirepentis
PTRG_11789
I
0.429
ZBAI_05541
Zygosaccharomyces bailii
ZBAI_05541
I
0.429
ZBAI_00389
Zygosaccharomyces bailii
ZBAI_00389
I
0.429
fgenesh1_pg.scaffold_41000062
Monosiga brevicollis
fgenesh1_pg.scaffold_41000062
I
0.428
HMPREF1120_08862
Exophiala dermatitidis
HMPREF1120_08862
I
0.428
K443DRAFT_7978
Laccaria amethystina
K443DRAFT_7978
I
0.427
PIIN_06327
Piriformospora indica
PIIN_06327
I
0.426
GLOTRDRAFT_38143
Gloeophyllum trabeum
GLOTRDRAFT_38143
I
0.426
M413DRAFT_21819
Hebeloma cylindrosporum
M413DRAFT_21819
N
0.425
M422DRAFT_89155
Sphaerobolus stellatus
M422DRAFT_89155
I
0.425
PHLGIDRAFT_36186
Phlebiopsis gigantea
PHLGIDRAFT_36186
I
0.423
SERLA73DRAFT_175892
Serpula lacrymans
SERLA73DRAFT_175892
I
0.423
SCLCIDRAFT_74705
Scleroderma citrinum
SCLCIDRAFT_74705
I
0.423
RHTO_05563
Rhodosporidium toruloides
RHTO_05563
N
0.423
PISMIDRAFT_64161
Pisolithus microcarpus
PISMIDRAFT_64161
I
0.423
PLEOSDRAFT_173235
Pleurotus ostreatus
PLEOSDRAFT_173235
I
0.423
gw1.12.933.1
Heterobasidion annosum
gw1.12.933.1
I
0.423
POSPLDRAFT_104707
Postia placenta
POSPLDRAFT_104707
I
0.423
PILCRDRAFT_826683
Piloderma croceum
PILCRDRAFT_826683
I
0.423
POSPLDRAFT_43059
Postia placenta
POSPLDRAFT_43059
I
0.423
RTG_00382
Rhodotorula glutinis
RTG_00382
N
0.423
LACBIDRAFT_298964
Laccaria bicolor
LACBIDRAFT_298964
I
0.423
HYDPIDRAFT_139999
Hydnomerulius pinastri
HYDPIDRAFT_139999
I
0.423
HETIRDRAFT_478862
Heterobasidion irregulare
HETIRDRAFT_478862
I
0.423
JAAARDRAFT_209377
Jaapia argillacea
JAAARDRAFT_209377
I
0.423
K443DRAFT_122047
Laccaria amethystina
K443DRAFT_122047
I
0.423
LACBIDRAFT_312467
Laccaria bicolor
LACBIDRAFT_312467
I
0.423
GALMADRAFT_229167
Galerina marginata
GALMADRAFT_229167
I
0.423
GALMADRAFT_1345908
Galerina marginata
GALMADRAFT_1345908
I
0.423
BN946_scf184844.g53
Trametes cinnabarina
BN946_scf184844.g53
I
0.423
AGABI2DRAFT_190999
Agaricus bisporus
AGABI2DRAFT_190999
I
0.423
CERSUDRAFT_116408
Ceriporiopsis subvermispora
CERSUDRAFT_116408
I
0.423
CY34DRAFT_812082
Suillus luteus
CY34DRAFT_812082
I
0.423
DICSQDRAFT_93113
Dichomitus squalens
DICSQDRAFT_93113
I
0.423
M404DRAFT_22580
Pisolithus tinctorius
M404DRAFT_22580
I
0.423
GLOTRDRAFT_140738
Gloeophyllum trabeum
GLOTRDRAFT_140738
I
0.423
M413DRAFT_276090
Hebeloma cylindrosporum
M413DRAFT_276090
I
0.423
PAXRUDRAFT_825171
Paxillus rubicundulus
PAXRUDRAFT_825171
I
0.423
PAXINDRAFT_15428
Paxillus involutus
PAXINDRAFT_15428
I
0.423
Moror_2980
Moniliophthora roreri
Moror_2980
I
0.423
GALMADRAFT_240284
Galerina marginata
GALMADRAFT_240284
N
0.422
Moror_8177
Moniliophthora roreri
Moror_8177
I
0.422
GLOINDRAFT_47695
Rhizophagus irregularis
GLOINDRAFT_47695
I
0.422
PAAG_02636
Paracoccidioides sp lutzii
PAAG_02636
I
0.421
PABG_03121
Paracoccidioides brasiliensis
PABG_03121
I
0.421
CC1G_07617
Coprinopsis cinerea
CC1G_07617
I
0.421
M378DRAFT_177991
Amanita muscaria
M378DRAFT_177991
I
0.420
GLOINDRAFT_25061
Rhizophagus irregularis
GLOINDRAFT_25061
I
0.420
M378DRAFT_459398
Amanita muscaria
M378DRAFT_459398
I
0.420
KLTH0F13926g
Lachancea thermotolerans
KLTH0F13926g
I
0.419
PAS_chr2-1_0017
Komagataella pastoris
PAS_chr2-1_0017
I
0.419
fgenesh1_pg.C_scaffold_7000434
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_7000434
I
0.419
BOTBODRAFT_190207
Botryobasidium botryosum
BOTBODRAFT_190207
I
0.419
Kwal_21061
Kluyveromyces waltii
Kwal_21061
I
0.419
MVLG_00275
Microbotryum violaceum
MVLG_00275
N
0.419
XP_002490896.1
Pichia pastoris
XP_002490896.1
I
0.419
KLTH0F13926g
Kluyveromyces thermotolerans
KLTH0F13926g
I
0.419
NV14822
Nasonia vitripennis
NV14822
I
0.418
PAXRUDRAFT_414321
Paxillus rubicundulus
PAXRUDRAFT_414321
I
0.418
CTRG_00834
Candida tropicalis
CTRG_00834
I
0.417
estExt_fgenesh1_pg.C_chr_3.10092
Pichia stipitis
estExt_fgenesh1_pg.C_chr_3.10092
I
0.417
CD36_27640
Candida dubliniensis
CD36_27640
I
0.417
CaO19.10341
Candida albicans
CaO19.10341
I
0.417
G210_0578
Candida maltosa
G210_0578
I
0.417
SCHCODRAFT_256949
Schizophyllum commune
SCHCODRAFT_256949
N
0.417
PHACADRAFT_188459
Phanerochaete carnosa
PHACADRAFT_188459
I
0.417
GNLVRS01_PISO0K11912g
Millerozyma farinosa
GNLVRS01_PISO0K11912g
I
0.417
GNLVRS01_PISO0L11913g
Millerozyma farinosa
GNLVRS01_PISO0L11913g
I
0.417
PICST_67218
Scheffersomyces stipitis
PICST_67218
I
0.417
LELG_00108
Lodderomyces elongisporus
LELG_00108
I
0.417
DEHA2E09460g
Debaryomyces hansenii
DEHA2E09460g
I
0.417
SPAPADRAFT_59824
Spathaspora passalidarum
SPAPADRAFT_59824
I
0.417
V565_068660
Rhizoctonia solani
V565_068660
I
0.416
JAAARDRAFT_93880
Jaapia argillacea
JAAARDRAFT_93880
I
0.416
FIBRA_04764
Fibroporia radiculosa
FIBRA_04764
I
0.415
FIBRA_03355
Fibroporia radiculosa
FIBRA_03355
I
0.415