fgenesh1_pg.C_scaffold_8000024 (Sporobolomyces roseus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh1_pg.C_scaffold_8000024 T334115_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_8000024 Sox 543 612

Links

Other Sox family TFs
Other Sporobolomyces roseus TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Moror_9029 Moniliophthora roreri Moror_9029 N 0.464
BN946_scf184994.g55 Trametes cinnabarina BN946_scf184994.g55 I 0.457
HETIRDRAFT_476671 Heterobasidion irregulare HETIRDRAFT_476671 N 0.451
Genemark.3077_g Heterobasidion annosum Genemark.3077_g N 0.451
M422DRAFT_126587 Sphaerobolus stellatus M422DRAFT_126587 N 0.447
M422DRAFT_121750 Sphaerobolus stellatus M422DRAFT_121750 N 0.447
MVLG_00343 Microbotryum violaceum MVLG_00343 N 0.443
DICSQDRAFT_67430 Dichomitus squalens DICSQDRAFT_67430 I 0.440
E5Q_02264 Mixia osmundae E5Q_02264 N 0.438
PGTG_16202 Puccinia graminis PGTG_16202 I 0.435
MELLADRAFT_94219 Melampsora laricipopulina MELLADRAFT_94219 N 0.435
RTG_00382 Rhodotorula glutinis RTG_00382 N 0.432
PAXRUDRAFT_55546 Paxillus rubicundulus PAXRUDRAFT_55546 N 0.432
CERSUDRAFT_123639 Ceriporiopsis subvermispora CERSUDRAFT_123639 N 0.432
FIBRA_04764 Fibroporia radiculosa FIBRA_04764 I 0.431
CY34DRAFT_56447 Suillus luteus CY34DRAFT_56447 N 0.430
SERLA73DRAFT_18452 Serpula lacrymans SERLA73DRAFT_18452 I 0.429
RHTO_05563 Rhodosporidium toruloides RHTO_05563 N 0.428
FOMPIDRAFT_140591 Fomitopsis pinicola FOMPIDRAFT_140591 I 0.428
FOMPIDRAFT_1081834 Fomitopsis pinicola FOMPIDRAFT_1081834 I 0.428
J056_002105 Wallemia ichthyophaga J056_002105 N 0.426
CC1G_07617 Coprinopsis cinerea CC1G_07617 I 0.425
PAN0_018c5621 Pseudozyma antarctica PAN0_018c5621 N 0.422
PaG_05617 Pseudozyma aphidis PaG_05617 N 0.422
PTRG_10423 Pyrenophora triticirepentis PTRG_10423 I 0.421
BOTBODRAFT_99971 Botryobasidium botryosum BOTBODRAFT_99971 N 0.418
UHOR_08562 Ustilago hordei UHOR_08562 N 0.416
PaG_02426 Pseudozyma aphidis PaG_02426 N 0.416
BN946_scf184994.g60 Trametes cinnabarina BN946_scf184994.g60 N 0.415
POSPLDRAFT_104707 Postia placenta POSPLDRAFT_104707 I 0.415
MVLG_04343 Microbotryum violaceum MVLG_04343 N 0.415
POSPLDRAFT_43059 Postia placenta POSPLDRAFT_43059 I 0.415