fgenesh2_kg.8_#_22_#_1744_1_CCUX_EXTA (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh2_kg.8_#_22_#_1744_1_CCUX_EXTA T334128_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.8_#_22_#_1744_1_CCUX_EXTA Sox 5 44
fgenesh2_kg.8_#_22_#_1744_1_CCUX_EXTA Sox 80 156

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.22.128.1 Fragilariopsis cylindrus gw1.22.128.1 N 0.510