fgenesh2_pg.scaffold_4000274 (Monosiga brevicollis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh2_pg.scaffold_4000274 T334159_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_4000274 Sox 1010 1065

Links

Other Sox family TFs
Other Monosiga brevicollis TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.564
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.530
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.530
ENSCING00000000505 Ciona intestinalis ENSCING00000000505 I 0.503
SVUK_0001721701 Strongylus vulgaris SVUK_0001721701 N 0.496
ASIS014204 Anopheles sinensis ASIS014204 N 0.485
estExt_fgenesh3_kg.C_170031 Heterobasidion annosum estExt_fgenesh3_kg.C_170031 I 0.450
HETIRDRAFT_439796 Heterobasidion irregulare HETIRDRAFT_439796 I 0.450
LOAG_08062 Loa loa LOAG_08062 N 0.445
GPUH_0002275001 Gongylonema pulchrum GPUH_0002275001 N 0.445
WUBG_06999 Wuchereria bancrofti WUBG_06999 N 0.445
TCLT_0000071201 Thelazia callipaeda TCLT_0000071201 N 0.445
BTMF_0000420901 Brugia timori BTMF_0000420901 N 0.445
scaffold593-EXSNAP2012.5 Pristionchus exspectatus scaffold593-EXSNAP2012.5 N 0.444
PPA12247 Pristionchus pacificus PPA12247 N 0.444
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N 0.444
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.442
fgenesh1_pg.18_#_36 Coccomyxa subellipsoidea C169 fgenesh1_pg.18_#_36 N 0.438
AAEL002381 Aedes aegypti AAEL002381 N 0.438
fgeneshCV_pg.C_scaffold_18000199 Chlorella vulgaris fgeneshCV_pg.C_scaffold_18000199 N 0.438
GUITHDRAFT_163393 Guillardia theta GUITHDRAFT_163393 N 0.428
CBN25379 Caenorhabditis brenneri CBN25379 I 0.419