fgenesh2_pg.scaffold_5000103 (Monosiga brevicollis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh2_pg.scaffold_5000103 T334163_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_5000103 Sox 458 501

Links

Other Sox family TFs
Other Monosiga brevicollis TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPMAG00000002918 Petromyzon marinus ENSPMAG00000002918 N 0.587
LotgiG105193 Lottia gigantea LotgiG105193 N 0.587
DAPPUDRAFT_306626 Daphnia pulex DAPPUDRAFT_306626 N 0.543
CGI_10027770 Crassostrea gigas CGI_10027770 N 0.542
EMIHUDRAFT_117867 Emiliania huxleyi EMIHUDRAFT_117867 I 0.535
CAOG_02676 Capsaspora owczarzaki CAOG_02676 N 0.527
CapteG178344 Capitella teleta CapteG178344 N 0.519
PTSG_02585 Salpingoeca rosetta PTSG_02585 N 0.516
fgenesh2_pg.C_Chr_03000283 Micromonas sp RCC299 fgenesh2_pg.C_Chr_03000283 N 0.515
TC012902 Tribolium castaneum TC012902 N 0.505
SPOG_02196 Schizosaccharomyces cryophilus SPOG_02196 N 0.503
V565_033960 Rhizoctonia solani V565_033960 N 0.503
LDEC009506 Leptinotarsa decemlineata LDEC009506 N 0.500
ACEP23223 Atta cephalotes ACEP23223 N 0.498
L892_g25427 Steinernema scapterisci L892_g25427 N 0.494
ACYPI006465 Acyrthosiphon pisum ACYPI006465 N 0.494
SOCG_00309 Schizosaccharomyces octosporus SOCG_00309 N 0.470
Cflo_06149--XP_001122099.1_APIME Camponotus floridanus Cflo_06149--XP_001122099.1_APIME N 0.458
fgenesh1_pm.9__12 Bigelowiella natans fgenesh1_pm.9__12 N 0.458
Moror_16065 Moniliophthora roreri Moror_16065 I 0.456
TriadG56122 Trichoplax adhaerens TriadG56122 N 0.451
PLICRDRAFT_179042 Plicaturopsis crispa PLICRDRAFT_179042 I 0.450
AMSG_09450 Thecamonas trahens AMSG_09450 N 0.433
XP_002163918.1 Hydra magnipapillata XP_002163918.1 I 0.432
ACEP25270 Atta cephalotes ACEP25270 N 0.429
NV14872 Nasonia vitripennis NV14872 N 0.415