fgeneshDP_kg.C_scaffold_625000001 (Dictyostelium purpureum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgeneshDP_kg.C_scaffold_625000001 T334178_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.484 0.464
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.484 0.464
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.484 0.464
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.484 0.464
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshDP_kg.C_scaffold_625000001 Sox 52 120

Links

Other Sox family TFs
Other Dictyostelium purpureum TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EFA82179.1 Polysphondylium pallidum EFA82179.1 I 0.707
fgeneshDP_kg.C_scaffold_93000006 Dictyostelium purpureum fgeneshDP_kg.C_scaffold_93000006 I 0.686
gw1.204.1.1 Dictyostelium purpureum gw1.204.1.1 I 0.656
estExt_fgeneshDP_kg.C_1050006 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1050006 I 0.650
nhp6 Dictyostelium discoideum DDB_G0270260 N 0.605
nhp6 Schizosaccharomyces pombe SPAC57A10.09c I 0.561
PHLGIDRAFT_113118 Phlebiopsis gigantea PHLGIDRAFT_113118 I 0.519
fgenesh1_pg.C_scaffold_9000255 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_9000255 I 0.517
SPPG_05251 Spizellomyces punctatus SPPG_05251 I 0.510
KNAG_0H00800 Kazachstania naganishii KNAG_0H00800 I 0.509
SJAG_03603 Schizosaccharomyces japonicus SJAG_03603 I 0.507
CERSUDRAFT_85760 Ceriporiopsis subvermispora CERSUDRAFT_85760 I 0.502
BN946_scf184999.g62 Trametes cinnabarina BN946_scf184999.g62 I 0.502
NCAS_0A11010 Naumovozyma castellii NCAS_0A11010 I 0.502
FIBRA_06299 Fibroporia radiculosa FIBRA_06299 I 0.502
Scas_Contig667.17 Saccharomyces castellii Scas_Contig667.17 I 0.502
DICSQDRAFT_109066 Dichomitus squalens DICSQDRAFT_109066 I 0.502
PHACADRAFT_164552 Phanerochaete carnosa PHACADRAFT_164552 I 0.500
A1Q1_01571 Trichosporon asahii A1Q1_01571 I 0.497
KAFR_0G01620 Kazachstania africana KAFR_0G01620 I 0.496
CAGL0H08541g Candida glabrata CAGL0H08541g I 0.496
NDAI_0A05290 Naumovozyma dairenensis NDAI_0A05290 I 0.492
PDK_20s1437671g003 Phoenix dactylifera PDK_20s1437671g003 I 0.492
SOCG_02294 Schizosaccharomyces octosporus SOCG_02294 I 0.489
SPOG_00531 Schizosaccharomyces cryophilus SPOG_00531 I 0.487
M413DRAFT_45791 Hebeloma cylindrosporum M413DRAFT_45791 I 0.484
NHP6B Saccharomyces cerevisiae YBR089C-A D 0.484
NHP6A Saccharomyces cerevisiae YPR052C D 0.484
GLOTRDRAFT_99857 Gloeophyllum trabeum GLOTRDRAFT_99857 I 0.484
906_YBR089C-A Saccharomyces mikatae 906_YBR089C-A I 0.484
2032_YBR089C-A Saccharomyces bayanus 2032_YBR089C-A I 0.484
22477_YPR052C Saccharomyces mikatae 22477_YPR052C I 0.484
25751_YPR052C Saccharomyces bayanus 25751_YPR052C I 0.484
Moror_35 Moniliophthora roreri Moror_35 I 0.484
GALMADRAFT_227783 Galerina marginata GALMADRAFT_227783 I 0.484
SU7_3651 Saccharomyces arboricola SU7_3651 I 0.484
TBLA_0I02240 Tetrapisispora blattae TBLA_0I02240 I 0.484
SU7_0186 Saccharomyces arboricola SU7_0186 I 0.484
SKUD_180604 Saccharomyces kudriavzevii SKUD_180604 I 0.484
AGABI2DRAFT_56560 Agaricus bisporus AGABI2DRAFT_56560 I 0.484
SKUD_201106 Saccharomyces kudriavzevii SKUD_201106 I 0.484
CC1G_11882 Coprinopsis cinerea CC1G_11882 I 0.484
1377_YBR089C-A Saccharomyces paradoxus 1377_YBR089C-A I 0.484
PLEOSDRAFT_1048718 Pleurotus ostreatus PLEOSDRAFT_1048718 I 0.484
PLICRDRAFT_46399 Plicaturopsis crispa PLICRDRAFT_46399 I 0.484
Scas_Contig718.17 Saccharomyces castellii Scas_Contig718.17 I 0.482
Cucsa.339070 Cucumis sativus Cucsa.339070 I 0.482
Cla017295 Citrullus lanatus Cla017295 I 0.482
FOMPIDRAFT_1026139 Fomitopsis pinicola FOMPIDRAFT_1026139 I 0.482
NCAS_0I01260 Naumovozyma castellii NCAS_0I01260 I 0.482
K443DRAFT_671387 Laccaria amethystina K443DRAFT_671387 I 0.481
LACBIDRAFT_184303 Laccaria bicolor LACBIDRAFT_184303 I 0.481
MELLADRAFT_31192 Melampsora laricipopulina MELLADRAFT_31192 I 0.481
TCM_018380 Theobroma cacao TCM_018380 I 0.481
MVLG_07162 Microbotryum violaceum MVLG_07162 I 0.479
Ca_10804 Cicer arietinum Ca_10804 I 0.478
MTR_1g022345 Medicago truncatula MTR_1g022345 I 0.478
G210_1137 Candida maltosa G210_1137 I 0.477
SAKL0B07150g Lachancea kluyveri SAKL0B07150g I 0.477
LELG_04337 Lodderomyces elongisporus LELG_04337 I 0.477
LALA0_S09e03686g Lachancea lanzarotensis LALA0_S09e03686g I 0.477
KLLA0_B12056g Kluyveromyces lactis KLLA0_B12056g I 0.477
ZBAI_05520 Zygosaccharomyces bailii ZBAI_05520 I 0.477
TDEL_0C04750 Torulaspora delbrueckii TDEL_0C04750 I 0.477
Kwal_12539 Kluyveromyces waltii Kwal_12539 I 0.477
ZYRO0C15752g Zygosaccharomyces rouxii ZYRO0C15752g I 0.477
KLTH0E14850g Kluyveromyces thermotolerans KLTH0E14850g I 0.477
KLTH0E14850g Lachancea thermotolerans KLTH0E14850g I 0.477
ZBAI_00368 Zygosaccharomyces bailii ZBAI_00368 I 0.477
PHSY_006278 Pseudozyma hubeiensis PHSY_006278 I 0.477
L804_02852 Cryptococcus gattii L804_02852 I 0.475
CNF04730 Cryptococcus neoformans CNF04730 I 0.475
AMTR_s00078p00107740 Amborella trichopoda AMTR_s00078p00107740 I 0.475
GSMUA_Achr2G19630_001 Musa acuminata GSMUA_Achr2G19630_001 I 0.475
MPER_13045 Moniliophthora perniciosa MPER_13045 I 0.474
PRUPE_ppa002690mg Prunus persica PRUPE_ppa002690mg I 0.472
gene01265-v1.0-hybrid Fragaria vesca gene01265-v1.0-hybrid I 0.472
PK18077.1 Cannabis sativa PK18077.1 I 0.472
MDP0000828844 Malus domestica MDP0000828844 I 0.472
gene01264-v1.0-hybrid Fragaria vesca gene01264-v1.0-hybrid I 0.472
Ca_12487 Cicer arietinum Ca_12487 I 0.472
LjSGA_094514.1 Lotus japonicus LjSGA_094514.1 I 0.472
Pm015842 Prunus mume Pm015842 I 0.472
chr2.CM0225.40.nc Lotus japonicus chr2.CM0225.40.nc I 0.472
SCHCODRAFT_76744 Schizophyllum commune SCHCODRAFT_76744 I 0.471
fgenesh1_pg.C_chr_2000123 Mycosphaerella graminicola fgenesh1_pg.C_chr_2000123 I 0.470
Mycgr3G90433 Zymoseptoria tritici Mycgr3G90433 I 0.470
MDP0000310093 Malus domestica MDP0000310093 I 0.469
TPHA_0M01480 Tetrapisispora phaffii TPHA_0M01480 I 0.468
Kpol_1065p34 Vanderwaltozyma polyspora Kpol_1065p34 I 0.468
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.468
estExt_Genewise1Plus.C_11422 Mucor circinelloides estExt_Genewise1Plus.C_11422 I 0.468
SSRP1 Arabidopsis thaliana AT3G28730 I 0.467
Thhalv10003803m.g Eutrema salsugineum Thhalv10003803m.g I 0.467
Carubv10016819m.g Capsella rubella Carubv10016819m.g I 0.467
Cagra.0535s0005 Capsella grandiflora Cagra.0535s0005 I 0.467
BATDEDRAFT_89692 Batrachochytrium dendrobatidis BATDEDRAFT_89692 I 0.465
mgf001267m Mimulus guttatus mgf001267m I 0.463
HPODL_03671 Ogataea parapolymorpha HPODL_03671 I 0.461
estExt_Genewise1.C_20300 Phycomyces blakesleeanus estExt_Genewise1.C_20300 I 0.461
KUCA_T00001555001 Kuraishia capsulata KUCA_T00001555001 I 0.461
evm.TU.supercontig_211.6 Carica papaya evm.TU.supercontig_211.6 I 0.460
PSEUBRA_SCAF4g05002 Pseudozyma brasiliensis PSEUBRA_SCAF4g05002 I 0.459
PaG_04789 Pseudozyma aphidis PaG_04789 I 0.459
MSY001_2636 Malassezia sympodialis MSY001_2636 I 0.459
PAN0_004d2231 Pseudozyma antarctica PAN0_004d2231 I 0.459
UM02364 Ustilago maydis UM02364 I 0.459
KNAG_0J02470 Kazachstania naganishii KNAG_0J02470 I 0.458
estExt_fgenesh3_kg.C_50121 Heterobasidion annosum estExt_fgenesh3_kg.C_50121 I 0.458
HETIRDRAFT_440787 Heterobasidion irregulare HETIRDRAFT_440787 I 0.458
RHTO_03328 Rhodosporidium toruloides RHTO_03328 I 0.458
PGTG_04701 Puccinia graminis PGTG_04701 I 0.458
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.458
e_gw1.7.444.1 Tremella mesenterica e_gw1.7.444.1 I 0.456
PGUG_05245 Candida guilliermondii PGUG_05245 I 0.453
PGUG_05245 Meyerozyma guilliermondii PGUG_05245 I 0.453
Solyc02g087710.2 Solanum lycopersicum Solyc02g087710.2 I 0.452
PTTG_09594 Puccinia triticina PTTG_09594 I 0.452
PGSC0003DMG400001414 Solanum tuberosum PGSC0003DMG400001414 I 0.452
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.451
ATHMG Vitis vinifera VIT_14s0108g00040 I 0.450
PILCRDRAFT_812728 Piloderma croceum PILCRDRAFT_812728 I 0.450
M378DRAFT_77996 Amanita muscaria M378DRAFT_77996 I 0.450
JAAARDRAFT_49184 Jaapia argillacea JAAARDRAFT_49184 I 0.450
AACERI_AaceriADL310W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL310W I 0.449
Ecym_7459 Eremothecium cymbalariae Ecym_7459 I 0.449
DOTSEDRAFT_74007 Dothistroma septosporum DOTSEDRAFT_74007 I 0.449
CPAG_02417 Candida parapsilosis CPAG_02417 I 0.449
GNLVRS01_PISO0N04523g Millerozyma farinosa GNLVRS01_PISO0N04523g I 0.449
CORT_0E02670 Candida orthopsilosis CORT_0E02670 I 0.449
AGOS_ADL310W Ashbya gossypii AGOS_ADL310W I 0.449
sr13567 Sporisorium reilianum sr13567 I 0.449
SMAC_04223 Sordaria macrospora SMAC_04223 I 0.446
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I 0.446
PDE_04795 Penicillium oxalicum PDE_04795 I 0.446
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I 0.446
MGG_04489 Magnaporthe oryzae MGG_04489 I 0.446
MDP0000301546 Malus domestica MDP0000301546 I 0.446
PredSwiss_ASS2010_160.1 Pneumocystis carinii PredSwiss_ASS2010_160.1 I 0.446
ATEG_04695 Aspergillus terreus CADATEAG00010213 I 0.446
gw1.199.74.1 Physcomitrella patens gw1.199.74.1 I 0.446
orange1.1g006512m.g Citrus sinensis orange1.1g006512m.g I 0.444
Ciclev10011266m.g Citrus clementina Ciclev10011266m.g I 0.444
DEHA2D17710g Debaryomyces hansenii DEHA2D17710g I 0.443
SPAPADRAFT_62621 Spathaspora passalidarum SPAPADRAFT_62621 I 0.443
Kpol_376p1 Vanderwaltozyma polyspora Kpol_376p1 I 0.443
M438DRAFT_311243 Aureobasidium pullulans M438DRAFT_311243 I 0.443
M437DRAFT_40541 Aureobasidium melanogenum M437DRAFT_40541 I 0.443
MYCFIDRAFT_57980 Pseudocercospora fijiensis MYCFIDRAFT_57980 I 0.443
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.443
AUEXF2481DRAFT_68224 Aureobasidium subglaciale AUEXF2481DRAFT_68224 I 0.443
GNLVRS01_PISO0M04390g Millerozyma farinosa GNLVRS01_PISO0M04390g I 0.443
CD36_41610 Candida dubliniensis CD36_41610 I 0.443
estExt_Genewise1Plus.C_80270 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80270 I 0.443
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.443
GLYMA13G05140 Glycine max GLYMA13G05140 I 0.441
RO3G_07751 Rhizopus oryzae RO3G_07751 I 0.440
H072_4754 Dactylellina haptotyla H072_4754 I 0.439
F503_07006 Ophiostoma piceae uamh F503_07006 I 0.439
DACRYDRAFT_23197 Dacryopinax sp DACRYDRAFT_23197 I 0.439
SBOR_5988 Sclerotinia borealis SBOR_5988 I 0.439
SAPIO_CDS3210 Scedosporium apiospermum SAPIO_CDS3210 I 0.439
PGSC0003DMG400018099 Solanum tuberosum PGSC0003DMG400018099 I 0.439
MBM_05761 Marssonina brunnea MBM_05761 I 0.439
ATHMG Arabidopsis lyrata scaffold_500854.1 I 0.437
PAXRUDRAFT_828263 Paxillus rubicundulus PAXRUDRAFT_828263 I 0.432
Thaps6683 Thalassiosira pseudonana Thaps6683 I 0.432
HYDPIDRAFT_138070 Hydnomerulius pinastri HYDPIDRAFT_138070 I 0.432
BOTBODRAFT_30512 Botryobasidium botryosum BOTBODRAFT_30512 N 0.430
EDO05788.1 Babesia bovis EDO05788.1 I 0.430
CBV00234.1 Babesia bovis CBV00234.1 I 0.430
CBU86735.1 Babesia bovis CBU86735.1 I 0.430
CBF61859.1 Babesia bovis CBF61859.1 I 0.430
CBF61316.1 Babesia bovis CBF61316.1 I 0.430
CBF60306.1 Babesia bovis CBF60306.1 I 0.430
AAA27799.1 Babesia bovis AAA27799.1 I 0.430
CBF82108.1 Babesia bovis CBF82108.1 I 0.430
CBU85550.1 Babesia bovis CBU85550.1 I 0.430
CBU86344.1 Babesia bovis CBU86344.1 I 0.430
UHOR_03854 Ustilago hordei UHOR_03854 I 0.428
estExt_fgeneshPB_pg.C_360007 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_360007 I 0.427
WALSEDRAFT_53977 Wallemia sebi WALSEDRAFT_53977 I 0.427
Bostr.0556s0524 Boechera stricta Bostr.0556s0524 I 0.426
Bra033055 Brassica rapa Bra033055 N 0.426
Gorai.006G024900 Gossypium raimondii Gorai.006G024900 I 0.425
gw1.9.300.1 Sporobolomyces roseus gw1.9.300.1 I 0.425
YALI0_C11671g Yarrowia lipolytica YALI0_C11671g I 0.425
29701.m000600 Ricinus communis 29701.m000600 I 0.424
M407DRAFT_81488 Tulasnella calospora M407DRAFT_81488 I 0.424
Ciclev10012868m.g Citrus clementina Ciclev10012868m.g I 0.424
AWRI1499_3752 Brettanomyces bruxellensis AWRI1499_3752 I 0.424
Gorai.006G181900 Gossypium raimondii Gorai.006G181900 I 0.424
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.424
PVAR5_3907 Byssochlamys spectabilis PVAR5_3907 I 0.423
Cla018386 Citrullus lanatus Cla018386 I 0.423
Cucsa.067200 Cucumis sativus Cucsa.067200 I 0.423
PV09_01265 Verruconis gallopava PV09_01265 I 0.421
EMIHUDRAFT_252069 Emiliania huxleyi EMIHUDRAFT_252069 N 0.420
cassava42041.valid.m1 Manihot esculenta cassava42041.valid.m1 I 0.419
J056_004689 Wallemia ichthyophaga J056_004689 I 0.419
SERLA73DRAFT_187779 Serpula lacrymans SERLA73DRAFT_187779 I 0.419
CY34DRAFT_810312 Suillus luteus CY34DRAFT_810312 I 0.419
29822.m003476 Ricinus communis 29822.m003476 I 0.419
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.417
Pm002934 Prunus mume Pm002934 I 0.417
PRUPE_ppa007518mg Prunus persica PRUPE_ppa007518mg I 0.417
A1O3_03664 Capronia epimyces A1O3_03664 I 0.417
Gorai.002G263800 Gossypium raimondii Gorai.002G263800 I 0.417
H102_01953 Trichophyton rubrum H102_01953 I 0.416
MCYG_05548 Microsporum canis MCYG_05548 I 0.416
ARB_02895 Arthroderma benhamiae ARB_02895 I 0.416
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.416
TRV_07738 Trichophyton verrucosum TRV_07738 I 0.416
H105_01968 Trichophyton soudanense H105_01968 I 0.416
TESG_06912 Trichophyton tonsurans TESG_06912 I 0.416
MCYG_05548 Arthroderma otae MCYG_05548 I 0.416
e_gw1.1.2450.1 Mucor circinelloides e_gw1.1.2450.1 I 0.415
UV8b_6830 Ustilaginoidea virens UV8b_6830 I 0.415