fgeneshHS_pg.scaffold_50000080 (Naegleria gruberi)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgeneshHS_pg.scaffold_50000080 T334184_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshHS_pg.scaffold_50000080 Sox 514 557

Links

Other Sox family TFs
Other Naegleria gruberi TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.000
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.000
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.000
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.000
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.000
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.000
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.000
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.000
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.000
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.000
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.000
Zfp647 Mus musculus ENSMUSG00000054967 I 0.000
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.000
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.000
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.000
ZNF250 Sorex araneus ENSSARG00000004999 I 0.000
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.000
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.000
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.000
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.000
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.000
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.000
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.000
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.000
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.000
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.000
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.000
ZNF250 Felis catus ENSFCAG00000013730 I 0.000
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.000
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.000
ZNF250 Homo sapiens ENSG00000196150 D 0.000