fgeneshHS_pg.scaffold_50000080 (Naegleria gruberi)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgeneshHS_pg.scaffold_50000080 T334184_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshHS_pg.scaffold_50000080 Sox 514 557

Links

Other Sox family TFs
Other Naegleria gruberi TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI006465 Acyrthosiphon pisum ACYPI006465 N 0.422
ACEP22065 Atta cephalotes ACEP22065 N 0.451
fgenesh1_pm.9__12 Bigelowiella natans fgenesh1_pm.9__12 N 0.480
BGIBMGA002931 Bombyx mori BGIBMGA002931 N 0.451
W97_08209 Coniosporium apollinis W97_08209 N 0.445
KGM_21779 Danaus plexippus KGM_21779 N 0.440
ubtfl Danio rerio ENSDARG00000038780 N 0.436
YQE_12532 Dendroctonus ponderosae YQE_12532 N 0.451
GG13363 Drosophila erecta FBgn0105635 N 0.421
GUITHDRAFT_163519 Guillardia theta GUITHDRAFT_163519 I 0.436
LDEC009474 Leptinotarsa decemlineata LDEC009474 N 0.451
MGG_00866 Magnaporthe oryzae MGG_00866 N 0.484
MBM_07425 Marssonina brunnea MBM_07425 N 0.438
MCINX004608 Melitaea cinxia MCINX004608 N 0.451
fgenesh2_pg.C_Chr_03000283 Micromonas sp RCC299 fgenesh2_pg.C_Chr_03000283 N 0.466
MYCTH_2308522 Myceliophthora thermophila MYCTH_2308522 I 0.477
UCRNP2_5126 Neofusicoccum parvum UCRNP2_5126 N 0.454
OIDMADRAFT_54116 Oidiodendron maius OIDMADRAFT_54116 N 0.422
PODANS_5_8400 Podospora anserina PODANS_5_8400 N 0.425
PTSG_02585 Salpingoeca rosetta PTSG_02585 N 0.429
SBOR_2840 Sclerotinia borealis SBOR_2840 N 0.441
SINV11745 Solenopsis invicta SINV11745 N 0.451
THITE_22048 Thielavia terrestris THITE_22048 I 0.426
TRIATDRAFT_37227 Trichoderma atroviride TRIATDRAFT_37227 N 0.426
TRIVIDRAFT_16124 Trichoderma virens TRIVIDRAFT_16124 N 0.425
GSTUM_00007488001 Tuber melanosporum GSTUM_00007488001 N 0.476