fgeneshPB_pg.10__1 (Phycomyces blakesleeanus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgeneshPB_pg.10__1 T334208_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshPB_pg.10__1 Sox 88 128

Links

Other Sox family TFs
Other Phycomyces blakesleeanus TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_05329 Aegilops tauschii F775_05329 I 0.000
Aquca_078_00053 Aquilegia coerulea Aquca_078_00053 I 0.000
DAG1 Arabidopsis lyrata fgenesh2_kg.5__2679__AT3G61850.1 I 0.000
fgenesh2_kg.1__2996__AT1G28310.2 Arabidopsis lyrata fgenesh2_kg.1__2996__AT1G28310.2 I 0.000
DAG2 Arabidopsis lyrata scaffold_403629.1 I 0.000
DOF1.2 Arabidopsis thaliana AT1G21340 I 0.000
AT1G28310 Arabidopsis thaliana AT1G28310 I 0.000
DAG1 Arabidopsis thaliana AT3G61850 I 0.000
DOF2.5 Arabidopsis thaliana AT2G46590 D 0.000
Bostr.13158s0188 Boechera stricta Bostr.13158s0188 I 0.000
Bostr.25993s0106 Boechera stricta Bostr.25993s0106 I 0.000
Bostr.25570s0008 Boechera stricta Bostr.25570s0008 I 0.000
BRADI4G33000 Brachypodium distachyon BRADI4G33000 I 0.000
BRADI3G38980 Brachypodium distachyon BRADI3G38980 I 0.000
BRADI2G50370 Brachypodium distachyon BRADI2G50370 I 0.000
BRADI1G26570 Brachypodium distachyon BRADI1G26570 I 0.000
BRADI1G14570 Brachypodium distachyon BRADI1G14570 I 0.000
Bo8g097330 Brassica oleracea Bo8g097330 I 0.000
Bo5g055750 Brassica oleracea Bo5g055750 I 0.000
Bo7g059460 Brassica oleracea Bo7g059460 I 0.000
Bo1g023750 Brassica oleracea Bo1g023750 I 0.000
Bo3g181400 Brassica oleracea Bo3g181400 I 0.000
Bo4g007120 Brassica oleracea Bo4g007120 I 0.000
Bo4g197200 Brassica oleracea Bo4g197200 I 0.000
Bo7g048220 Brassica oleracea Bo7g048220 I 0.000
Bra004525 Brassica rapa Bra004525 I 0.000
Bra039272 Brassica rapa Bra039272 I 0.000
Bra032891 Brassica rapa Bra032891 I 0.000
Bra030089 Brassica rapa Bra030089 I 0.000
Bra014418 Brassica rapa Bra014418 I 0.000
Bra014297 Brassica rapa Bra014297 I 0.000
PK26086.1 Cannabis sativa PK26086.1 I 0.000
Cagra.0050s0039 Capsella grandiflora Cagra.0050s0039 I 0.000
Cagra.1632s0025 Capsella grandiflora Cagra.1632s0025 I 0.000
Cagra.0483s0060 Capsella grandiflora Cagra.0483s0060 I 0.000
Carubv10023459m.g Capsella rubella Carubv10023459m.g I 0.000
Carubv10017642m.g Capsella rubella Carubv10017642m.g I 0.000
Carubv10011507m.g Capsella rubella Carubv10011507m.g I 0.000
evm.TU.supercontig_1117.2 Carica papaya evm.TU.supercontig_1117.2 I 0.000
Ca_00295 Cicer arietinum Ca_00295 I 0.000
Ca_19648 Cicer arietinum Ca_19648 I 0.000
Cla000615 Citrullus lanatus Cla000615 I 0.000
Cla020007 Citrullus lanatus Cla020007 I 0.000
Cla001393 Citrullus lanatus Cla001393 I 0.000
Ciclev10021862m.g Citrus clementina Ciclev10021862m.g I 0.000
Ciclev10016017m.g Citrus clementina Ciclev10016017m.g I 0.000
orange1.1g025998m.g Citrus sinensis orange1.1g025998m.g I 0.000
orange1.1g024229m.g Citrus sinensis orange1.1g024229m.g I 0.000
orange1.1g021502m.g Citrus sinensis orange1.1g021502m.g I 0.000
Cucsa.260210 Cucumis sativus Cucsa.260210 I 0.000
Cucsa.046040 Cucumis sativus Cucsa.046040 I 0.000
Cucsa.046300 Cucumis sativus Cucsa.046300 I 0.000
Eucgr.F02725 Eucalyptus grandis Eucgr.F02725 I 0.000
Thhalv10008213m.g Eutrema salsugineum Thhalv10008213m.g I 0.000
Thhalv10001503m.g Eutrema salsugineum Thhalv10001503m.g I 0.000
Thhalv10006092m.g Eutrema salsugineum Thhalv10006092m.g I 0.000
gene20567-v1.0-hybrid Fragaria vesca gene20567-v1.0-hybrid I 0.000
gene30428-v1.0-hybrid Fragaria vesca gene30428-v1.0-hybrid I 0.000
gene32526-v1.0-hybrid Fragaria vesca gene32526-v1.0-hybrid I 0.000
GLYMA04G41830 Glycine max GLYMA04G41830 I 0.000
GLYMA06G12950 Glycine max GLYMA06G12950 I 0.000
GLYMA07G31340 Glycine max GLYMA07G31340 I 0.000
GLYMA15G07730 Glycine max GLYMA15G07730 I 0.000
GLYMA13G31560 Glycine max GLYMA13G31560 I 0.000
GLYMA13G25120 Glycine max GLYMA13G25120 I 0.000
Gorai.009G170200 Gossypium raimondii Gorai.009G170200 I 0.000
Gorai.010G155200 Gossypium raimondii Gorai.010G155200 I 0.000
Gorai.009G252800 Gossypium raimondii Gorai.009G252800 I 0.000
MLOC_21982 Hordeum vulgare MLOC_21982 I 0.000
LPERR01G27080 Leersia perrieri LPERR01G27080 I 0.000
LPERR03G21700 Leersia perrieri LPERR03G21700 I 0.000
LPERR03G29630 Leersia perrieri LPERR03G29630 I 0.000
LPERR06G09630 Leersia perrieri LPERR06G09630 I 0.000
LPERR07G13200 Leersia perrieri LPERR07G13200 I 0.000
LPERR08G15690 Leersia perrieri LPERR08G15690 I 0.000
LPERR09G10110 Leersia perrieri LPERR09G10110 I 0.000
LPERR12G14590 Leersia perrieri LPERR12G14590 I 0.000
MDP0000866809 Malus domestica MDP0000866809 I 0.000
MDP0000808238 Malus domestica MDP0000808238 I 0.000
MDP0000308863 Malus domestica MDP0000308863 I 0.000
MDP0000925497 Malus domestica MDP0000925497 I 0.000
MDP0000241840 Malus domestica MDP0000241840 I 0.000
MDP0000122904 Malus domestica MDP0000122904 I 0.000
MDP0000148548 Malus domestica MDP0000148548 I 0.000
MDP0000201509 Malus domestica MDP0000201509 I 0.000
cassava41591.m1 Manihot esculenta cassava41591.m1 I 0.000
cassava3181.m1 Manihot esculenta cassava3181.m1 I 0.000
MTR_2g013370 Medicago truncatula MTR_2g013370 I 0.000
MTR_4g089095 Medicago truncatula MTR_4g089095 I 0.000
MTR_8g068210 Medicago truncatula MTR_8g068210 I 0.000
mgf020517m Mimulus guttatus mgf020517m I 0.000
mgf021583m Mimulus guttatus mgf021583m I 0.000
GSMUA_Achr8G32880_001 Musa acuminata GSMUA_Achr8G32880_001 I 0.000
GSMUA_Achr10G03030_001 Musa acuminata GSMUA_Achr10G03030_001 I 0.000
GSMUA_Achr10G05890_001 Musa acuminata GSMUA_Achr10G05890_001 I 0.000
GSMUA_Achr11G10790_001 Musa acuminata GSMUA_Achr11G10790_001 I 0.000
GSMUA_Achr11G23850_001 Musa acuminata GSMUA_Achr11G23850_001 I 0.000
GSMUA_Achr2G13350_001 Musa acuminata GSMUA_Achr2G13350_001 I 0.000
GSMUA_Achr3G29620_001 Musa acuminata GSMUA_Achr3G29620_001 I 0.000
GSMUA_Achr6G19530_001 Musa acuminata GSMUA_Achr6G19530_001 I 0.000
OBART10G09450 Oryza barthii OBART10G09450 I 0.000
OBART01G31500 Oryza barthii OBART01G31500 I 0.000
OB08G25950 Oryza brachyantha OB08G25950 I 0.000
ORGLA12G0149800 Oryza glaberrima ORGLA12G0149800 I 0.000
ORGLA09G0106100 Oryza glaberrima ORGLA09G0106100 I 0.000
ORGLA06G0286500 Oryza glaberrima ORGLA06G0286500 I 0.000
ORGLA07G0128800 Oryza glaberrima ORGLA07G0128800 I 0.000
ORGLA01G0056600 Oryza glaberrima ORGLA01G0056600 I 0.000
ORGLA08G0164300 Oryza glaberrima ORGLA08G0164300 I 0.000
ORGLA03G0243100 Oryza glaberrima ORGLA03G0243100 I 0.000
OGLUM07G15440 Oryza glumaepatula OGLUM07G15440 I 0.000
OGLUM09G14460 Oryza glumaepatula OGLUM09G14460 I 0.000
OGLUM01G06520 Oryza glumaepatula OGLUM01G06520 I 0.000
OGLUM01G30020 Oryza glumaepatula OGLUM01G30020 I 0.000
OGLUM01G35670 Oryza glumaepatula OGLUM01G35670 I 0.000
OGLUM03G27090 Oryza glumaepatula OGLUM03G27090 I 0.000
OGLUM08G19840 Oryza glumaepatula OGLUM08G19840 I 0.000
BGIOSGA035911 Oryza indica BGIOSGA035911 I 0.000
BGIOSGA002935 Oryza indica BGIOSGA002935 I 0.000
BGIOSGA030959 Oryza indica BGIOSGA030959 I 0.000
BGIOSGA028889 Oryza indica BGIOSGA028889 I 0.000
BGIOSGA000793 Oryza indica BGIOSGA000793 I 0.000
BGIOSGA010234 Oryza indica BGIOSGA010234 I 0.000
OMERI01G06150 Oryza meridionalis OMERI01G06150 I 0.000
OMERI09G10600 Oryza meridionalis OMERI09G10600 I 0.000
OMERI01G28620 Oryza meridionalis OMERI01G28620 I 0.000
OMERI08G14870 Oryza meridionalis OMERI08G14870 I 0.000
OMERI12G12140 Oryza meridionalis OMERI12G12140 I 0.000
ONIVA01G35960 Oryza nivara ONIVA01G35960 I 0.000
ONIVA07G15480 Oryza nivara ONIVA07G15480 I 0.000
ONIVA08G20810 Oryza nivara ONIVA08G20810 I 0.000
ONIVA09G14400 Oryza nivara ONIVA09G14400 I 0.000
ONIVA12G16170 Oryza nivara ONIVA12G16170 I 0.000
ONIVA03G27230 Oryza nivara ONIVA03G27230 I 0.000
ONIVA01G06900 Oryza nivara ONIVA01G06900 I 0.000
OPUNC01G30540 Oryza punctata OPUNC01G30540 I 0.000
OPUNC08G16830 Oryza punctata OPUNC08G16830 I 0.000
OPUNC03G23930 Oryza punctata OPUNC03G23930 I 0.000
OPUNC07G14510 Oryza punctata OPUNC07G14510 I 0.000
ORUFI08G21040 Oryza rufipogon ORUFI08G21040 I 0.000
ORUFI01G34710 Oryza rufipogon ORUFI01G34710 I 0.000
ORUFI01G06530 Oryza rufipogon ORUFI01G06530 I 0.000
ORUFI09G14860 Oryza rufipogon ORUFI09G14860 I 0.000
ORUFI12G19370 Oryza rufipogon ORUFI12G19370 I 0.000
OS08G0490100 Oryza sativa OS08G0490100 I 0.000
OS03G0619151 Oryza sativa OS03G0619151 I 0.000
OS01G0758200 Oryza sativa OS01G0758200 I 0.000
OS12G0590700 Oryza sativa OS12G0590700 I 0.000
Pavir.Da01417 Panicum virgatum Pavir.Da01417 I 0.000
Pavir.Ca02552 Panicum virgatum Pavir.Ca02552 I 0.000
Pavir.Ba01771 Panicum virgatum Pavir.Ba01771 I 0.000
Pavir.Ea00244 Panicum virgatum Pavir.Ea00244 I 0.000
POPTR_0002s07150 Populus trichocarpa POPTR_0002s07150 I 0.000
Pm022643 Prunus mume Pm022643 I 0.000
Pm009975 Prunus mume Pm009975 I 0.000
PRUPE_ppa020903mg Prunus persica PRUPE_ppa020903mg I 0.000
PRUPE_ppa008850mg Prunus persica PRUPE_ppa008850mg I 0.000
30170.m013941 Ricinus communis 30170.m013941 I 0.000
29851.m002375 Ricinus communis 29851.m002375 I 0.000
27985.m000859 Ricinus communis 27985.m000859 I 0.000
SapurV1A.0267s0010 Salix purpurea SapurV1A.0267s0010 I 0.000
SapurV1A.0256s0160 Salix purpurea SapurV1A.0256s0160 I 0.000
SapurV1A.0066s0240 Salix purpurea SapurV1A.0066s0240 I 0.000
SapurV1A.0013s0150 Salix purpurea SapurV1A.0013s0150 I 0.000
SapurV1A.0256s0150 Salix purpurea SapurV1A.0256s0150 I 0.000
Si030774m.g Setaria italica Si030774m.g I 0.000
Si007011m.g Setaria italica Si007011m.g I 0.000
Si002728m.g Setaria italica Si002728m.g I 0.000
Solyc04g070960.1 Solanum lycopersicum Solyc04g070960.1 I 0.000
PGSC0003DMG400000786 Solanum tuberosum PGSC0003DMG400000786 I 0.000
PGSC0003DMG400021361 Solanum tuberosum PGSC0003DMG400021361 I 0.000
PGSC0003DMG400022431 Solanum tuberosum PGSC0003DMG400022431 I 0.000
Sb02g027480 Sorghum bicolor Sb02g027480 I 0.000
Sb08g019830 Sorghum bicolor Sb08g019830 I 0.000
Sb08g000330 Sorghum bicolor Sb08g000330 I 0.000
Sb07g028850 Sorghum bicolor Sb07g028850 I 0.000
Sb05g000310 Sorghum bicolor Sb05g000310 I 0.000
Sb03g003050 Sorghum bicolor Sb03g003050 I 0.000
Sb02g034320 Sorghum bicolor Sb02g034320 I 0.000
Sb01g014530 Sorghum bicolor Sb01g014530 I 0.000
TCM_029918 Theobroma cacao TCM_029918 I 0.000
TCM_035473 Theobroma cacao TCM_035473 I 0.000
Traes_2BS_C94BD2E9F Triticum aestivum Traes_2BS_C94BD2E9F I 0.000
TRAES3BF063900020CFD_g Triticum aestivum TRAES3BF063900020CFD_g I 0.000
Traes_5DL_C5D9E96D4 Triticum aestivum Traes_5DL_C5D9E96D4 I 0.000
Q6RK62_WHEAT Triticum aestivum Q6RK62_WHEAT D 0.000
Traes_5BL_44A8BCF95 Triticum aestivum Traes_5BL_44A8BCF95 I 0.000
Traes_4DS_4CF7C00FE Triticum aestivum Traes_4DS_4CF7C00FE I 0.000
Traes_4BS_4B1025766 Triticum aestivum Traes_4BS_4B1025766 I 0.000
Traes_4AL_573E93FCC Triticum aestivum Traes_4AL_573E93FCC I 0.000
Traes_1DL_56A46D571 Triticum aestivum Traes_1DL_56A46D571 I 0.000
TRIUR3_33098 Triticum urartu TRIUR3_33098 I 0.000
MNB1A Zea mays MNB1A_MAIZE D 0.000
GRMZM2G451771 Zea mays GRMZM2G451771 I 0.000
GRMZM2G449950 Zea mays GRMZM2G449950 I 0.000
GRMZM2G134545 Zea mays GRMZM2G134545 I 0.000
GRMZM2G131897 Zea mays GRMZM2G131897 I 0.000
GRMZM2G089850 Zea mays GRMZM2G089850 I 0.000
GRMZM2G064655 Zea mays GRMZM2G064655 I 0.000
GRMZM2G061292 Zea mays GRMZM2G061292 I 0.000
GRMZM2G045678 Zea mays GRMZM2G045678 I 0.000
Dof2 Zea mays GRMZM2G009406 D 0.000
GRMZM2G378490 Zea mays GRMZM2G378490 I 0.000