gw1.21.309.1 (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 gw1.21.309.1 T334243_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.21.309.1 Sox 5 65

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.30.62.1 Fragilariopsis cylindrus gw1.30.62.1 N 0.498
Phatr3_J45662 Phaeodactylum tricornutum Phatr3_J45662 I 0.444
Phatr3_J34626 Phaeodactylum tricornutum Phatr3_J34626 N 0.439
Phatr3_J39880 Phaeodactylum tricornutum Phatr3_J39880 N 0.439
M404DRAFT_63984 Pisolithus tinctorius M404DRAFT_63984 I 0.426
TRIATDRAFT_321166 Trichoderma atroviride TRIATDRAFT_321166 I 0.423
TRIVIDRAFT_228694 Trichoderma virens TRIVIDRAFT_228694 I 0.423