gw1.72.30.1 (Phycomyces blakesleeanus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 gw1.72.30.1 T334260_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN

NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.441 0.470
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.72.30.1 Sox 24 89

Links

Other Sox family TFs
Other Phycomyces blakesleeanus TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NCU02819 Neurospora crassa NCU02819 D 0.441
PV06_04154 Exophiala oligosperma PV06_04154 I 0.435
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.435
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.450
PGTG_12120 Puccinia graminis PGTG_12120 I 0.461
PGTG_10028 Puccinia graminis PGTG_10028 I 0.461
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I 0.453
NV10488 Nasonia vitripennis NV10488 I 0.432
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.441
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.458
MVLG_01270 Microbotryum violaceum MVLG_01270 I 0.504
MELLADRAFT_85039 Melampsora laricipopulina MELLADRAFT_85039 I 0.467
MCINX005468 Melitaea cinxia MCINX005468 I 0.432
MBM_02410 Marssonina brunnea MBM_02410 I 0.448
M7I_1578 Glarea lozoyensis M7I_1578 I 0.441
M438DRAFT_338286 Aureobasidium pullulans M438DRAFT_338286 I 0.443
M437DRAFT_15090 Aureobasidium melanogenum M437DRAFT_15090 I 0.417
PV07_09313 Cladophialophora immunda PV07_09313 I 0.435
PV08_04655 Exophiala spinifera PV08_04655 I 0.435
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.429
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.552
fgeneshMC_pg.1_#_1771 Mucor circinelloides fgeneshMC_pg.1_#_1771 I 0.556
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.614
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.441
Z519_04692 Cladophialophora bantiana Z519_04692 I 0.435
Z518_04911 Rhinocladiella mackenziei Z518_04911 I 0.435
Z517_02317 Fonsecaea pedrosoi Z517_02317 I 0.435
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.460
TC012723 Tribolium castaneum TC012723 I 0.432
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.448
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.441
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.448
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I 0.510
PV11_09703 Exophiala sideris PV11_09703 I 0.435
PV10_01993 Exophiala mesophila PV10_01993 I 0.435
M408DRAFT_328926 Serendipita vermifera M408DRAFT_328926 I 0.419
RO3G_07013 Rhizopus oryzae RO3G_07013 I 0.601
DRE_06603 Drechslerella stenobrocha DRE_06603 I 0.508
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.432
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.423
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.446
RO3G_15755 Rhizopus oryzae RO3G_15755 I 0.572
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.425
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.432
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.416
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.569
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.435
A1O5_06047 Cladophialophora psammophila A1O5_06047 I 0.435
A1O3_08778 Capronia epimyces A1O3_08778 I 0.435
A1O1_01197 Capronia coronata A1O1_01197 I 0.435
RO3G_16060 Rhizopus oryzae RO3G_16060 I 0.552
RO3G_09728 Rhizopus oryzae RO3G_09728 I 0.572
RO3G_07543 Rhizopus oryzae RO3G_07543 I 0.568
AUEXF2481DRAFT_32739 Aureobasidium subglaciale AUEXF2481DRAFT_32739 I 0.417
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.432
PV04_00198 Capronia semiimmersa PV04_00198 I 0.435
G647_10093 Cladophialophora carrionii G647_10093 I 0.435
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I 0.435
HMEL005034 Heliconius melpomene HMEL005034 I 0.432
FPSE_02664 Fusarium pseudograminearum FPSE_02664 I 0.437
EV44_g2383 Erysiphe necator EV44_g2383 I 0.448
KGM_14572 Danaus plexippus KGM_14572 I 0.432
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I 0.555
EPUS_09213 Endocarpon pusillum EPUS_09213 I 0.452
LotgiG109021 Lottia gigantea LotgiG109021 I 0.429
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.426
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.422
GB43084 Apis mellifera GB43084 I 0.432
fgenesh2_pg.scaffold_121000046 Branchiostoma floridae fgenesh2_pg.scaffold_121000046 N 0.435
fgenesh2_pg.scaffold_16000083 Branchiostoma floridae fgenesh2_pg.scaffold_16000083 N 0.435
PVAR5_2976 Byssochlamys spectabilis PVAR5_2976 N 0.429
ISCW015985 Ixodes scapularis ISCW015985 N 0.429
gw1.16.190.1 Phycomyces blakesleeanus gw1.16.190.1 N 0.565
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.429
e_gw1.30.104.1 Phycomyces blakesleeanus e_gw1.30.104.1 N 0.548
HelroG145107 Helobdella robusta HelroG145107 N 0.424
PV09_06039 Verruconis gallopava PV09_06039 N 0.438
PABG_05916 Paracoccidioides brasiliensis PABG_05916 N 0.447
PAAG_05470 Paracoccidioides sp lutzii PAAG_05470 N 0.448
BDDG_03827 Blastomyces dermatitidis BDDG_03827 N 0.447
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.429
ENSCING00000018888 Ciona intestinalis ENSCING00000018888 N 0.445
TTHERM_00216040 Tetrahymena thermophila TTHERM_00216040 N 0.428
UCRNP2_5474 Neofusicoccum parvum UCRNP2_5474 N 0.466
W97_04667 Coniosporium apollinis W97_04667 N 0.420
GLOINDRAFT_349538 Rhizophagus irregularis GLOINDRAFT_349538 N 0.428
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.437