gw.283.36.1 (Branchiostoma floridae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 gw.283.36.1 T334268_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw.283.36.1 Sox 546 614

Links

Other Sox family TFs
Other Branchiostoma floridae TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
gw.77.73.1 Branchiostoma floridae gw.77.73.1 N 0.741
estExt_Genewise1.C_10428 Volvox carteri estExt_Genewise1.C_10428 N 0.496
ASIS014507 Anopheles sinensis ASIS014507 N 0.454
AATE003884 Anopheles atroparvus AATE003884 N 0.454
ADAC005115 Anopheles darlingi ADAC005115 N 0.447
AALB010796 Anopheles albimanus AALB010796 N 0.447
CHLREDRAFT_142283 Chlamydomonas reinhardtii CHLREDRAFT_142283 N 0.447
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I 0.434
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I 0.434
RSKR_0000472700 Rhabditophanes kr3021 RSKR_0000472700 N 0.430
estExt_Genewise1.C_510099 Volvox carteri estExt_Genewise1.C_510099 N 0.428
RSKR_0000540800 Rhabditophanes kr3021 RSKR_0000540800 N 0.424
AFAF013045 Anopheles farauti AFAF013045 N 0.424
ADIR000496 Anopheles dirus ADIR000496 N 0.424
RSKR_0000171200 Rhabditophanes kr3021 RSKR_0000171200 N 0.424