mgf013454m (Mimulus guttatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 mgf013454m T334295_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mgf013454m Sox 157 200

Links

Other Sox family TFs
Other Mimulus guttatus TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
mgf000387m Mimulus guttatus mgf000387m N 0.741
MLOC_54605 Hordeum vulgare MLOC_54605 N 0.707
TRIUR3_20834 Triticum urartu TRIUR3_20834 N 0.707
F775_20121 Aegilops tauschii F775_20121 N 0.707
Traes_6DL_647FC758E1 Triticum aestivum Traes_6DL_647FC758E1 N 0.707
Pavir.J01310 Panicum virgatum Pavir.J01310 N 0.697
Si017699m.g Setaria italica Si017699m.g N 0.697
ORUFI02G35580 Oryza rufipogon ORUFI02G35580 I 0.697
OGLUM02G35200 Oryza glumaepatula OGLUM02G35200 I 0.697
BGIOSGA009119 Oryza indica BGIOSGA009119 N 0.697
OS02G0770600 Oryza sativa OS02G0770600 N 0.697
OMERI02G32400 Oryza meridionalis OMERI02G32400 I 0.697
Pavir.Aa00349 Panicum virgatum Pavir.Aa00349 N 0.697
OBART02G34050 Oryza barthii OBART02G34050 N 0.697
ORGLA02G0294700 Oryza glaberrima ORGLA02G0294700 N 0.697
LPERR02G27910 Leersia perrieri LPERR02G27910 N 0.697
ONIVA02G36110 Oryza nivara ONIVA02G36110 I 0.697
OLONG_015646 Oryza longistaminata OLONG_015646 N 0.697
OB07G29110 Oryza brachyantha OB07G29110 N 0.697
OPUNC02G31450 Oryza punctata OPUNC02G31450 N 0.697
Aquca_014_00165 Aquilegia coerulea Aquca_014_00165 N 0.695
OB02G40920 Oryza brachyantha OB02G40920 N 0.691
orange1.1g020440m.g Citrus sinensis orange1.1g020440m.g N 0.687
Ciclev10001827m.g Citrus clementina Ciclev10001827m.g N 0.687
Gorai.005G260200 Gossypium raimondii Gorai.005G260200 N 0.680
gene11787-v1.0-hybrid Fragaria vesca gene11787-v1.0-hybrid N 0.655
POPTR_0003s01620 Populus trichocarpa POPTR_0003s01620 N 0.645
PK04394.1 Cannabis sativa PK04394.1 N 0.642
Ciclev10001601m.g Citrus clementina Ciclev10001601m.g N 0.641
SapurV1A.0647s0030 Salix purpurea SapurV1A.0647s0030 N 0.641
orange1.1g017878m.g Citrus sinensis orange1.1g017878m.g N 0.641
evm.TU.supercontig_49.134 Carica papaya evm.TU.supercontig_49.134 N 0.636
VIT_12s0034g00960 Vitis vinifera VIT_12s0034g00960 N 0.623
BRADI3G57700 Brachypodium distachyon BRADI3G57700 N 0.623
POPTR_0001s21610 Populus trichocarpa POPTR_0001s21610 N 0.622
SapurV1A.0869s0080 Salix purpurea SapurV1A.0869s0080 N 0.622
MDP0000597087 Malus domestica MDP0000597087 N 0.621
TCM_006422 Theobroma cacao TCM_006422 N 0.620
30116.m000393 Ricinus communis 30116.m000393 N 0.616
PGSC0003DMG400023744 Solanum tuberosum PGSC0003DMG400023744 N 0.608
cassava19406.valid.m1 Manihot esculenta cassava19406.valid.m1 N 0.601
GSMUA_Achr2G01240_001 Musa acuminata GSMUA_Achr2G01240_001 N 0.596
PGSC0003DMG400026151 Solanum tuberosum PGSC0003DMG400026151 N 0.583
MDP0000634922 Malus domestica MDP0000634922 N 0.581
GSMUA_Achr8G18160_001 Musa acuminata GSMUA_Achr8G18160_001 N 0.581
evm.TU.supercontig_49.133 Carica papaya evm.TU.supercontig_49.133 N 0.579
PRUPE_ppa007591mg Prunus persica PRUPE_ppa007591mg N 0.573
Cla002005 Citrullus lanatus Cla002005 N 0.566
Cucsa.239250 Cucumis sativus Cucsa.239250 N 0.566
Thhalv10028879m.g Eutrema salsugineum Thhalv10028879m.g N 0.566
PK16821.1 Cannabis sativa PK16821.1 N 0.560
VIT_18s0001g03950 Vitis vinifera VIT_18s0001g03950 N 0.548