Ocbimv22020621m.g (Octopus bimaculoides)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ocbimv22020621m.g T334317_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22020621m.p Sox 89 123

Links

Other Sox family TFs
Other Octopus bimaculoides TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000792 Aedes aegypti AAEL000792 I 0.706
AALB009865 Anopheles albimanus AALB009865 I 0.537
AALB009868 Anopheles albimanus AALB009868 I 0.656
AARA000827 Anopheles arabiensis AARA000827 I 0.706
AARA005391 Anopheles arabiensis AARA005391 I 0.656
AARA005393 Anopheles arabiensis AARA005393 I 0.537
AARA011914 Anopheles arabiensis AARA011914 I 0.534
AATE006542 Anopheles atroparvus AATE006542 N 0.515
AATE012157 Anopheles atroparvus AATE012157 N 0.659
ACAC_0000143401 Angiostrongylus cantonensis ACAC_0000143401 N 0.552
ACEP10855 Atta cephalotes ACEP10855 I 0.660
ACEP10859 Atta cephalotes ACEP10859 I 0.541
ACEP25270 Atta cephalotes ACEP25270 N 0.505
ACEP25857 Atta cephalotes ACEP25857 I 0.706
ACHR009359 Anopheles christyi ACHR009359 I 0.657
ACOM022800 Anopheles coluzzii ACOM022800 I 0.656
ACOM022803 Anopheles coluzzii ACOM022803 I 0.424
ACOM026664 Anopheles coluzzii ACOM026664 N 0.706
ACOM034662 Anopheles coluzzii ACOM034662 I 0.534
ACUA008554 Anopheles culicifacies ACUA008554 I 0.656
ACUA011783 Anopheles culicifacies ACUA011783 N 0.706
ACUA026266 Anopheles culicifacies ACUA026266 I 0.540
ACUA026638 Anopheles culicifacies ACUA026638 I 0.537
ADIR005630 Anopheles dirus ADIR005630 I 0.662
ADIR005633 Anopheles dirus ADIR005633 I 0.537
ADIR009659 Anopheles dirus ADIR009659 I 0.706
AEPI003628 Anopheles epiroticus AEPI003628 I 0.656
AEPI007651 Anopheles epiroticus AEPI007651 N 0.472
AEPI007946 Anopheles epiroticus AEPI007946 N 0.657
AEPI010515 Anopheles epiroticus AEPI010515 I 0.537
AFAF017335 Anopheles farauti AFAF017335 I 0.606
AFUN009319 Anopheles funestus AFUN009319 I 0.706
AFUN010196 Anopheles funestus AFUN010196 I 0.537
AFUN010199 Anopheles funestus AFUN010199 I 0.609
AGAP010923 Anopheles gambiae AGAP010923 I 0.424
AGAP012033 Anopheles gambiae AGAP012033 I 0.706
AMAM006332 Anopheles maculatus AMAM006332 I 0.656
AMAM015893 Anopheles maculatus AMAM015893 I 0.468
AMAM018985 Anopheles maculatus AMAM018985 I 0.657
AMAM022760 Anopheles maculatus AMAM022760 N 0.472
AMEC008804 Anopheles melas AMEC008804 I 0.537
AMEC012053 Anopheles melas AMEC012053 I 0.656
AMEC014560 Anopheles melas AMEC014560 I 0.706
AMEC016085 Anopheles melas AMEC016085 I 0.540
AMEM010579 Anopheles merus AMEM010579 I 0.424
AMEM014190 Anopheles merus AMEM014190 I 0.656
AMIN001219 Anopheles minimus AMIN001219 I 0.534
AMIN008219 Anopheles minimus AMIN008219 I 0.659
AMIN009301 Anopheles minimus AMIN009301 I 0.656
AMIN009304 Anopheles minimus AMIN009304 I 0.537
ANCCAN_22368 Ancylostoma caninum ANCCAN_22368 N 0.508
ANCDUO_17471 Ancylostoma duodenale ANCDUO_17471 I 0.416
ANCDUO_25812 Ancylostoma duodenale ANCDUO_25812 N 0.615
AQUA001259 Anopheles quadriannulatus AQUA001259 I 0.424
AQUA001262 Anopheles quadriannulatus AQUA001262 I 0.656
AQUA004309 Anopheles quadriannulatus AQUA004309 I 0.540
ASIS016076 Anopheles sinensis ASIS016076 N 0.706
ASTEI06129 Anopheles stephensi ASTEI06129 N 0.657
ASTEI06407 Anopheles stephensi ASTEI06407 I 0.656
ASU_07083 Ascaris suum ASU_07083 I 0.433
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 N 0.450
BBX Homo sapiens ENSG00000114439 D 0.424
BGIBMGA003080 Bombyx mori BGIBMGA003080 I 0.656
BGIBMGA004367 Bombyx mori BGIBMGA004367 I 0.659
BGLB002734 Biomphalaria glabrata BGLB002734 I 0.706
BGLB010904 Biomphalaria glabrata BGLB010904 I 0.614
BOTBODRAFT_575815 Botryobasidium botryosum BOTBODRAFT_575815 N 0.442
Cflo_01077--XP_001122045.1_APIME Camponotus floridanus Cflo_01077--XP_001122045.1_APIME N 0.706
CLEC006959 Cimex lectularius CLEC006959 I 0.541
CLEC006961 Cimex lectularius CLEC006961 I 0.607
CPIJ012042 Culex quinquefasciatus CPIJ012042 I 0.656
CPIJ012500 Culex quinquefasciatus CPIJ012500 N 0.706
CPIJ014016 Culex quinquefasciatus CPIJ014016 N 0.515
CPIJ014424 Culex quinquefasciatus CPIJ014424 I 0.553
CPIJ017659 Culex quinquefasciatus CPIJ017659 I 0.509
CpipJ_CPIJ012042 Culex pipiens CpipJ_CPIJ012042 I 0.656
CpipJ_CPIJ012500 Culex pipiens CpipJ_CPIJ012500 N 0.706
CpipJ_CPIJ014016 Culex pipiens CpipJ_CPIJ014016 N 0.515
CpipJ_CPIJ014424 Culex pipiens CpipJ_CPIJ014424 I 0.553
CpipJ_CPIJ017659 Culex pipiens CpipJ_CPIJ017659 I 0.509
CY34DRAFT_106474 Suillus luteus CY34DRAFT_106474 N 0.418
D918_08316 Trichuris suis D918_08316 N 0.568
DAPPUDRAFT_346928 Daphnia pulex DAPPUDRAFT_346928 N 0.480
ENSAMEG00000016773 Ailuropoda melanoleuca ENSAMEG00000016773 I 0.424
ENSAMXG00000007582 Astyanax mexicanus ENSAMXG00000007582 I 0.479
ENSCPOG00000024750 Cavia porcellus ENSCPOG00000024750 I 0.565
ENSCSAVG00000000494 Ciona savignyi ENSCSAVG00000000494 I 0.424
ENSDNOG00000034433 Dasypus novemcinctus ENSDNOG00000034433 N 0.437
ENSDORG00000003967 Dipodomys ordii ENSDORG00000003967 I 0.616
ENSDORG00000012440 Dipodomys ordii ENSDORG00000012440 I 0.616
ENSFALG00000002572 Ficedula albicollis ENSFALG00000002572 I 0.607
ENSGMOG00000014613 Gadus morhua ENSGMOG00000014613 N 0.448
ENSMEUG00000008151 Macropus eugenii ENSMEUG00000008151 I 0.605
ENSMEUG00000011116 Macropus eugenii ENSMEUG00000011116 I 0.448
ENSMEUG00000015665 Macropus eugenii ENSMEUG00000015665 I 0.530
ENSNLEG00000009528 Nomascus leucogenys ENSNLEG00000009528 I 0.489
ENSNLEG00000010228 Nomascus leucogenys ENSNLEG00000010228 I 0.456
ENSOARG00000009998 Ovis aries ENSOARG00000009998 I 0.541
ENSPMAG00000010371 Petromyzon marinus ENSPMAG00000010371 I 0.614
ENSPSIG00000009504 Pelodiscus sinensis ENSPSIG00000009504 I 0.652
ENSPTRG00000005969 Pan troglodytes ENSPTRG00000005969 I 0.561
ENSTGUG00000002931 Taeniopygia guttata ENSTGUG00000002931 I 0.598
ENSTSYG00000012536 Tarsius syrichta ENSTSYG00000012536 I 0.605
ENSTTRG00000005878 Tursiops truncatus ENSTTRG00000005878 I 0.655
ENSVPAG00000000908 Vicugna pacos ENSVPAG00000000908 I 0.616
GB40960 Apis mellifera GB40960 I 0.706
genemark-nMf.1.1.scaf16788-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf16788-processed-gene-0.1 I 0.482
Gfo_R009506 Geospiza fortis Gfo_R009506 I 0.569
GH23191 Drosophila grimshawi FBgn0130648 N 0.419
GLOINDRAFT_28614 Rhizophagus irregularis GLOINDRAFT_28614 N 0.495
GLOINDRAFT_339213 Rhizophagus irregularis GLOINDRAFT_339213 N 0.429
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.465
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.443
GRMZM2G150348 Zea mays GRMZM2G150348 N 0.440
HBP1 Echinops telfairi ENSETEG00000018542 I 0.448
Hbp1 Dipodomys ordii ENSDORG00000010576 I 0.448
Hbp1 Mus musculus ENSMUSG00000002996 D 0.448
HBP1 Homo sapiens ENSG00000105856 D 0.466
HBP1 Sorex araneus ENSSARG00000007731 I 0.448
HelroG148277 Helobdella robusta HelroG148277 N 0.478
HMEL016850 Heliconius melpomene HMEL016850 I 0.706
Hsal_04214--XP_001122045.1_APIME Harpegnathos saltator Hsal_04214--XP_001122045.1_APIME N 0.706
Hsal_04828--XP_001122993.1_APIME Harpegnathos saltator Hsal_04828--XP_001122993.1_APIME I 0.607
ISCW009925 Ixodes scapularis ISCW009925 I 0.614
KGM_05609 Danaus plexippus KGM_05609 N 0.706
L596_g15056 Steinernema carpocapsae L596_g15056 I 0.433
L798_02392 Zootermopsis nevadensis L798_02392 I 0.650
L798_04020 Zootermopsis nevadensis L798_04020 N 0.526
L798_09360 Zootermopsis nevadensis L798_09360 N 0.537
L798_12045 Zootermopsis nevadensis L798_12045 I 0.514
L889_g21840 Steinernema feltiae L889_g21840 I 0.433
L892_g2180 Steinernema scapterisci L892_g2180 I 0.433
L893_g27370 Steinernema glaseri L893_g27370 I 0.433
L898_g19824 Steinernema monticolum L898_g19824 I 0.433
L898_g3197 Steinernema monticolum L898_g3197 I 0.508
LCUP001585 Lucilia cuprina LCUP001585 I 0.656
LDEC007549 Leptinotarsa decemlineata LDEC007549 N 0.706
LLOJ005525 Lutzomyia longipalpis LLOJ005525 I 0.656
LotgiG120517 Lottia gigantea LotgiG120517 I 0.443
LotgiG88815 Lottia gigantea LotgiG88815 I 0.614
M404DRAFT_79773 Pisolithus tinctorius M404DRAFT_79773 N 0.417
MCINX002905 Melitaea cinxia MCINX002905 I 0.656
MESCA000459 Megaselia scalaris MESCA000459 I 0.662
MESCA009852 Megaselia scalaris MESCA009852 I 0.537
ML23337a Mnemiopsis leidyi ML23337a N 0.538
MPER_07337 Moniliophthora perniciosa MPER_07337 N 0.442
NBR_0000360901 Nippostrongylus brasiliensis NBR_0000360901 I 0.608
NBR_0002216901 Nippostrongylus brasiliensis NBR_0002216901 I 0.608
nDi.2.2.2.g10379 Dirofilaria immitis nDi.2.2.2.g10379 I 0.511
NECAME_14932 Necator americanus NECAME_14932 N 0.428
nLs.2.1.2.g10155 Litomosoides sigmodontis nLs.2.1.2.g10155 I 0.504
Ocbimv22007316m.g Octopus bimaculoides Ocbimv22007316m.g N 0.442
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.434
Ogr19131 Ophisaurus gracilis Ogr19131 N 0.448
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.443
PEQ_0000771101 Parascaris equorum PEQ_0000771101 I 0.440
PHACADRAFT_58554 Phanerochaete carnosa PHACADRAFT_58554 N 0.445
PHUM433270 Pediculus humanus PHUM433270 N 0.706
PPAI008595 Phlebotomus papatasi PPAI008595 N 0.637
PPAI009257 Phlebotomus papatasi PPAI009257 N 0.507
PXEA_0001829801 Protopolystoma xenopodis PXEA_0001829801 N 0.444
RPRC012125 Rhodnius prolixus RPRC012125 N 0.706
RPRC012780 Rhodnius prolixus RPRC012780 I 0.607
RPRC014334 Rhodnius prolixus RPRC014334 I 0.541
RSKR_0000394100 Rhabditophanes kr3021 RSKR_0000394100 N 0.456
SEPMUDRAFT_152382 Sphaerulina musiva SEPMUDRAFT_152382 N 0.516
SINV16626 Solenopsis invicta SINV16626 I 0.706
SINV19744 Solenopsis invicta SINV19744 I 0.541
SINV19753 Solenopsis invicta SINV19753 I 0.614
SMAR010127 Strigamia maritima SMAR010127 N 0.712
SOX1 Anolis carolinensis ENSACAG00000006346 I 0.561
SOX10 Meleagris gallopavo ENSMGAG00000012508 I 0.569
SOX10 Erinaceus europaeus ENSEEUG00000011263 I 0.616
SOX10 Procavia capensis ENSPCAG00000005913 I 0.616
SOX10 Ochotona princeps ENSOPRG00000013575 I 0.616
SOX11 Ornithorhynchus anatinus ENSOANG00000006361 N 0.444
SOX12 Sus scrofa ENSSSCG00000021920 I 0.608
SOX13 Felis catus ENSFCAG00000002900 I 0.598
SOX13 Microcebus murinus ENSMICG00000009236 I 0.605
SOX17 Procavia capensis ENSPCAG00000003188 I 0.708
SOX3 Pteropus vampyrus ENSPVAG00000003166 I 0.541
SOX30 Procavia capensis ENSPCAG00000010619 N 0.450
SOX5 Sorex araneus ENSSARG00000007963 I 0.605
SOX6 Erinaceus europaeus ENSEEUG00000006749 I 0.605
SOX6 Choloepus hoffmanni ENSCHOG00000005751 I 0.605
SOX6 Procavia capensis ENSPCAG00000001398 N 0.605
SOX6 Tupaia belangeri ENSTBEG00000002476 I 0.605
SOX6 Echinops telfairi ENSETEG00000001898 I 0.605
SOX9 Pteropus vampyrus ENSPVAG00000010505 I 0.616
SOX9 Dasypus novemcinctus ENSDNOG00000033826 I 0.663
sox9b Danio rerio ENSDARG00000043923 I 0.607
SPER_0000213401 Spirometra erinaceieuropaei SPER_0000213401 N 0.469
SPU_021407 Strongylocentrotus purpuratus SPU_021407 N 0.460
TC003791 Tribolium castaneum TC003791 I 0.607
TC009854 Tribolium castaneum TC009854 I 0.606
TCLT_0000083701 Thelazia callipaeda TCLT_0000083701 I 0.605
WUBG_09252 Wuchereria bancrofti WUBG_09252 I 0.504
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.448
XP_002935939 Xenopus tropicalis XP_002935939 I 0.607
YQE_08560 Dendroctonus ponderosae YQE_08560 I 0.476
YQE_13042 Dendroctonus ponderosae YQE_13042 I 0.706