Ocbimv22036873m.g (Octopus bimaculoides)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ocbimv22036873m.g T334332_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22036873m.p Sox 1 28
Ocbimv22036873m.p Sox 47 115

Links

Other Sox family TFs
Other Octopus bimaculoides TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.564
ECPE_0001091201 Echinostoma caproni ECPE_0001091201 N 0.563
csin104030 Clonorchis sinensis csin104030 N 0.560
ASTEI11547 Anopheles stephensi ASTEI11547 N 0.560
GL15829 Drosophila persimilis FBgn0153433 N 0.557
TRE_0001071501 Trichobilharzia regenti TRE_0001071501 N 0.557
MESCA001453 Megaselia scalaris MESCA001453 N 0.554
GPLIN_000727200 Globodera pallida GPLIN_000727200 N 0.551
ECPE_0001414101 Echinostoma caproni ECPE_0001414101 N 0.542
MDOA008389 Musca domestica MDOA008389 N 0.524
ENSTGUG00000006267 Taeniopygia guttata ENSTGUG00000006267 N 0.523
Gfo_R010508 Geospiza fortis Gfo_R010508 N 0.521
HMGB2 Ornithorhynchus anatinus ENSOANG00000029120 N 0.515
ENSETEG00000016379 Echinops telfairi ENSETEG00000016379 N 0.491
HMGB1 Tupaia belangeri ENSTBEG00000013046 N 0.472
CLEC007928 Cimex lectularius CLEC007928 N 0.465
ENSDNOG00000046638 Dasypus novemcinctus ENSDNOG00000046638 N 0.440
ENSDNOG00000034905 Dasypus novemcinctus ENSDNOG00000034905 N 0.439
AABR07040430.1 Rattus norvegicus ENSRNOG00000056486 N 0.416
ANCDUO_06482 Ancylostoma duodenale ANCDUO_06482 N 0.416