CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30031460m.g
(
Saccoglossus kowalevskii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Sakowv30031460m.g
T334351_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23924969_peptide
Sox
1513
1579
TKRTASGYILFASEIRSHLKKQYPDHSFGELSRVIGTEWRNLPPKQKSEYEERAALQAAAKEEASNE
23924970_peptide
Sox
1513
1579
TKRTASGYILFASEIRSHLKKQYPDHSFGELSRVIGTEWRNLPPKQKSEYEERAALQAAAKEEASNE
23924971_peptide
Sox
1513
1579
TKRTASGYILFASEIRSHLKKQYPDHSFGELSRVIGTEWRNLPPKQKSEYEERAALQAAAKEEASNE
23924972_peptide
Sox
1438
1504
TKRTASGYILFASEIRSHLKKQYPDHSFGELSRVIGTEWRNLPPKQKSEYEERAALQAAAKEEASNE
23924973_peptide
Sox
1353
1419
TKRTASGYILFASEIRSHLKKQYPDHSFGELSRVIGTEWRNLPPKQKSEYEERAALQAAAKEEASNE
23924974_peptide
Sox
1342
1408
TKRTASGYILFASEIRSHLKKQYPDHSFGELSRVIGTEWRNLPPKQKSEYEERAALQAAAKEEASNE
23924975_peptide
Sox
1144
1210
TKRTASGYILFASEIRSHLKKQYPDHSFGELSRVIGTEWRNLPPKQKSEYEERAALQAAAKEEASNE
Links
Other
Sox
family TFs
Other
Saccoglossus kowalevskii
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy