TF Information

Sakowv30039572m.g *(Saccoglossus kowalevskii)* Sox
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00505 (HMG_box)	IPR000910	Sakowv30039572m.g	T334356_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
BBX M05763_2.00	Homo sapiens	TGAWCDNYGWTCA	TGAWCRNHGWTCA	SELEX Yin et al.(2017) BBX_eDBD_HT-SELEX	0.675	0.681
BBX M05764_2.00	Homo sapiens	TGAACDNYGTTCA	TGAACRNHGTTCA	SELEX Yin et al.(2017) BBX_eDBD_Methyl-HT-SELEX	0.675	0.681
Bbx M00196_2.00	Mus musculus	TTCATTGA	TCAATGAA	PBM Badis et al.(2009) Bbx_3753	0.642	0.667
bbx M03975_2.00	Drosophila melanogaster	NAACAATDNCATTGTTN	NAACAATGNHATTGTTN	SELEX Nitta et al.(2015) bbx_1	0.545	0.565
Cic M00195_2.00	Mus musculus	NNTGCTGABN	NVTCAGCANN	PBM Badis et al.(2009) Cic_3454	0.485	0.551
cic M06452_2.00	Drosophila melanogaster	YYCATTSA	TSAATGRR	B1H Zhu et al.(2011) cic_SANGER_5_FBgn0028386	0.443	0.449
gei-3 M00711_2.00	Caenorhabditis elegans	NWNWMWDN	NHWKWNWN	PBM Narasimhan et al.(2015) pTH10038	0.442	0.507
For this family, TFs with SR scores > 0.415* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
23924264_peptide	Sox	42	110	VRRPMNAFLLFCKRHRSLVKERHPWLDNRSATKMLADMWAVLEGGEKEKYLELARQCKAAFLKAYPDYK

Links
Other Sox family TFs
Other *Saccoglossus kowalevskii* TFs

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288 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action