Aquca_045_00054 (Aquilegia coerulea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Aquca_045_00054 T334375_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HMG-1
M02720_2.00
Pisum sativum
STYGTDHTY

RADHACRAS
SELEX
Mathelier et al.(2014)
MA0044.1
0.622 0.725
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_045_00054.1 Sox 56 125
Aquca_045_00054.2 Sox 56 125
Aquca_045_00054.3 Sox 55 124
Aquca_045_00054.4 Sox 56 125
Aquca_045_00054.5 Sox 56 125

Links

Other Sox family TFs
Other Aquilegia coerulea TFs

Invalid Input OrderBy

305 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action