Ciclev10001601m.g (Citrus clementina)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ciclev10001601m.g T334429_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10001598m Sox 168 210
Ciclev10001601m Sox 168 210
Ciclev10001603m Sox 168 210

Links

Other Sox family TFs
Other Citrus clementina TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI45156 Acyrthosiphon pisum ACYPI45156 N 0.000
Alligator_sinensis_CCG009321.1 Alligator sinensis Alligator_sinensis_CCG009321.1 N 0.000
Alligator_sinensis_CCG001512.1 Alligator sinensis Alligator_sinensis_CCG001512.1 N 0.000
Aqu1.217717 Amphimedon queenslandica Aqu1.217717 N 0.000
ACEP11153 Atta cephalotes ACEP11153 N 0.000
ENSP00000379255-D1 Bos grunniens ENSP00000379255-D1 N 0.000
Brh_R006636 Buceros rhinoceros Brh_R006636 N 0.000
Aan_R000709 Calypte anna Aan_R000709 N 0.000
Cflo_10733--XP_624136.2_APIME Camponotus floridanus Cflo_10733--XP_624136.2_APIME N 0.000
XP_002156924.1 Hydra magnipapillata XP_002156924.1 N 0.000
ENSMICG00000005378 Microcebus murinus ENSMICG00000005378 N 0.000
Myotis_brandtii_GLI3_10009944 Myotis brandtii Myotis_brandtii_GLI3_10009944 N 0.000
Ogr17074 Ophisaurus gracilis Ogr17074 N 0.000
gli2b Oryzias latipes ENSORLG00000001328 N 0.000
ENSORLG00000015277 Oryzias latipes ENSORLG00000015277 N 0.000
ENSPMAG00000007806 Petromyzon marinus ENSPMAG00000007806 N 0.000
SMRZ_0000087601 Schistosoma margrebowiei SMRZ_0000087601 N 0.000
SMTD_0001685401 Schistosoma mattheei SMTD_0001685401 N 0.000
SROB_0000648801 Schistosoma rodhaini SROB_0000648801 N 0.000
SMU15013615 Schmidtea mediterranea SMU15013615 N 0.000
TMUE_s0120001200 Trichuris muris TMUE_s0120001200 N 0.000
GLI2 Tupaia belangeri ENSTBEG00000008264 N 0.000
gli2 Xenopus tropicalis XB-GENE-481810 N 0.000