Ciclev10002782m.g (Citrus clementina)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ciclev10002782m.g T334432_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.640 0.754
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10002782m Sox 38 107
Ciclev10002786m Sox 38 107
Ciclev10002789m Sox 38 107
Ciclev10002821m Sox 38 107

Links

Other Sox family TFs
Other Citrus clementina TFs

Invalid Input OrderBy

314 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action