fgenesh2_pg.C_Chr_03000283 (Micromonas sp RCC299)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh2_pg.C_Chr_03000283 T334507_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
99502 Sox 1055 1098

Links

Other Sox family TFs
Other Micromonas sp RCC299 TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30149.m000231 Ricinus communis 30149.m000231 I 0.000
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I 0.000
Ca_26916 Cicer arietinum Ca_26916 I 0.000
Cla015469 Citrullus lanatus Cla015469 I 0.000
Cucsa.050160 Cucumis sativus Cucsa.050160 I 0.000
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.000
GLYMA08G16190 Glycine max GLYMA08G16190 I 0.000
GLYMA12G36750 Glycine max GLYMA12G36750 I 0.000
GLYMA13G27455 Glycine max GLYMA13G27455 I 0.000
GLYMA15G42680 Glycine max GLYMA15G42680 I 0.000
MTR_3g027650 Medicago truncatula MTR_3g027650 I 0.000
MTR_3g028520 Medicago truncatula MTR_3g028520 I 0.000
POPTR_0001s27680 Populus trichocarpa POPTR_0001s27680 I 0.000
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.000
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.000