Gorai.002G115100 (Gossypium raimondii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Gorai.002G115100 T334533_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.640 0.754
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.002G115100.1 Sox 35 104
Gorai.002G115100.2 Sox 35 104
Gorai.002G115100.3 Sox 35 104
Gorai.002G115100.4 Sox 35 104
Gorai.002G115100.5 Sox 35 104
Gorai.002G115100.6 Sox 4 65
Gorai.002G115100.7 Sox 1 59

Links

Other Sox family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

346 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action