Gorai.007G078500 (Gossypium raimondii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Gorai.007G078500 T334543_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G078500.1 Sox 561 629
Gorai.007G078500.3 Sox 561 605
Gorai.007G078500.4 Sox 444 512

Links

Other Sox family TFs
Other Gossypium raimondii TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_018380 Theobroma cacao TCM_018380 I 0.491
GPUH_0000691201 Gongylonema pulchrum GPUH_0000691201 N 0.491
GPUH_0001196001 Gongylonema pulchrum GPUH_0001196001 N 0.491
GLYMA01G33240 Glycine max GLYMA01G33240 I 0.484
AC186524.3_FG005 Zea mays AC186524.3_FG005 N 0.479
PK25712.1 Cannabis sativa PK25712.1 N 0.475
ASTEI08849 Anopheles stephensi ASTEI08849 N 0.469
Gorai.006G024900 Gossypium raimondii Gorai.006G024900 I 0.467
mgf012563m Mimulus guttatus mgf012563m I 0.466
Bostr.0556s0524 Boechera stricta Bostr.0556s0524 I 0.460
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.459
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.457
D918_07944 Trichuris suis D918_07944 N 0.456
CY34DRAFT_106474 Suillus luteus CY34DRAFT_106474 N 0.451
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.451
ATHMG Arabidopsis lyrata scaffold_500854.1 I 0.450
fgenesh1_pg.chr_5_#_192 Ostreococcus RCC809 fgenesh1_pg.chr_5_#_192 N 0.444
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.439
MLOC_6673 Hordeum vulgare MLOC_6673 N 0.436
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.434
RTG_00841 Rhodotorula glutinis RTG_00841 N 0.433
DAPPUDRAFT_37735 Daphnia pulex DAPPUDRAFT_37735 I 0.432
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I 0.431
EMIHUDRAFT_117867 Emiliania huxleyi EMIHUDRAFT_117867 I 0.430
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.429
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.427
MPER_07337 Moniliophthora perniciosa MPER_07337 N 0.427
SPER_0000213401 Spirometra erinaceieuropaei SPER_0000213401 N 0.427
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.427
PHACADRAFT_58554 Phanerochaete carnosa PHACADRAFT_58554 N 0.427
GLOINDRAFT_339213 Rhizophagus irregularis GLOINDRAFT_339213 N 0.426
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.426
ENSLOCG00000004648 Lepisosteus oculatus ENSLOCG00000004648 I 0.425
TCM_042534 Theobroma cacao TCM_042534 I 0.425
EFV48447 Trichinella spiralis EFV48447 I 0.425
PRUPE_ppa002690mg Prunus persica PRUPE_ppa002690mg I 0.423
RO3G_05566 Rhizopus oryzae RO3G_05566 N 0.423
Pm015842 Prunus mume Pm015842 I 0.423
evm.TU.supercontig_211.6 Carica papaya evm.TU.supercontig_211.6 I 0.422
MDP0000301546 Malus domestica MDP0000301546 I 0.421
M404DRAFT_79773 Pisolithus tinctorius M404DRAFT_79773 N 0.421
SSRP1 Arabidopsis thaliana AT3G28730 I 0.420
Thhalv10003803m.g Eutrema salsugineum Thhalv10003803m.g I 0.420
Cagra.0535s0005 Capsella grandiflora Cagra.0535s0005 I 0.420
Carubv10016819m.g Capsella rubella Carubv10016819m.g I 0.420
POSPLDRAFT_104706 Postia placenta POSPLDRAFT_104706 N 0.420
AQUA002991 Anopheles quadriannulatus AQUA002991 N 0.419
HPBE_0002300401 Heligmosomoides bakeri HPBE_0002300401 N 0.419
Hsal_04828--XP_001122993.1_APIME Harpegnathos saltator Hsal_04828--XP_001122993.1_APIME I 0.419
AMEC001570 Anopheles melas AMEC001570 N 0.419
AGAP012335 Anopheles gambiae AGAP012335 N 0.419
PK18077.1 Cannabis sativa PK18077.1 I 0.419
AARA003414 Anopheles arabiensis AARA003414 N 0.419
ACOM026234 Anopheles coluzzii ACOM026234 N 0.419
BN946_scf184985.g43 Trametes cinnabarina BN946_scf184985.g43 N 0.419
Solyc02g087710.2 Solanum lycopersicum Solyc02g087710.2 I 0.417
PGSC0003DMG400001414 Solanum tuberosum PGSC0003DMG400001414 I 0.417
PGSC0003DMG400018099 Solanum tuberosum PGSC0003DMG400018099 I 0.417
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.415