CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.012G047000
(
Gossypium raimondii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Gorai.012G047000
T334553_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.012G047000.1
Sox
38
78
PKKPSTAFFYFLEDFRKEFQEQNPDIESMCNVEKCMARLQK
Links
Other
Sox
family TFs
Other
Gossypium raimondii
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.047620
Cucumis sativus
Cucsa.047620
N
0.566
TCM_029514
Theobroma cacao
TCM_029514
N
0.543
MDP0000392251
Malus domestica
MDP0000392251
N
0.541
Gorai.011G042300
Gossypium raimondii
Gorai.011G042300
N
0.505
MDP0000170945
Malus domestica
MDP0000170945
N
0.484
GRMZM2G024247
Zea mays
GRMZM2G024247
N
0.468