Lus10016695.g (Linum usitatissimum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Lus10016695.g T334566_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10016695 Sox 50 80
Lus10016695 Sox 75 104

Links

Other Sox family TFs
Other Linum usitatissimum TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.728
Bra012832 Brassica rapa Bra012832 N 0.689
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.676
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.665
Ca_10726 Cicer arietinum Ca_10726 N 0.628
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.617
Cla010647 Citrullus lanatus Cla010647 N 0.611
OLONG_009629 Oryza longistaminata OLONG_009629 N 0.603
OGLUM09G19410 Oryza glumaepatula OGLUM09G19410 N 0.594
OPUNC09G17310 Oryza punctata OPUNC09G17310 N 0.594
BGIOSGA031227 Oryza indica BGIOSGA031227 N 0.594
OBART09G18880 Oryza barthii OBART09G18880 N 0.594
MDP0000699531 Malus domestica MDP0000699531 N 0.581
Pm010381 Prunus mume Pm010381 N 0.542
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.530
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.521
HelroG178674 Helobdella robusta HelroG178674 N 0.516
Bo6g005800 Brassica oleracea Bo6g005800 N 0.511
PEQ_0000006801 Parascaris equorum PEQ_0000006801 N 0.500
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.492
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.489
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.487
EEL_0000370701 Elaeophora elaphi EEL_0000370701 N 0.466
CLEC004367 Cimex lectularius CLEC004367 N 0.466
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.465
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.461
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.460
D917_04157 Trichinella nativa D917_04157 N 0.454
ASIS002444 Anopheles sinensis ASIS002444 N 0.453
fgenesh1_pg.C_scaffold_10000369 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_10000369 N 0.452
sr12520 Sporisorium reilianum sr12520 N 0.444
TCF7L2 Tursiops truncatus ENSTTRG00000002360 N 0.432
SCHCODRAFT_105718 Schizophyllum commune SCHCODRAFT_105718 N 0.430
SINV25043 Solenopsis invicta SINV25043 N 0.428
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N 0.423
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N 0.423
SAKL0C03916g Lachancea kluyveri SAKL0C03916g N 0.423